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The map label for this gene is impC

Identifier: 116249138

GI number: 116249138

Start: 511731

End: 513212

Strand: Reverse

Name: impC

Synonym: pRL120473

Alternate gene names: NA

Gene position: 513212-511731 (Counterclockwise)

Preceding gene: 116249139

Following gene: 116249137

Centisome position: 58.99

GC content: 61.07

Gene sequence:

>1482_bases
ATGACCGCCGAAACGCAATTGCAAACAAAGGAAGACGTAGGCTTCGCGCCTGATGAGAACCTGCTCTCGAAGGTCGTTGC
GGCAACCCGCCAGACCGAGCCCGACCGTGCCCAGGACCTTCTGCGCACCCTTACCGATCAAGCCCTGAAGGGCACCGTCA
CCTATGATCGCAACCTGACGATCACCTTGAACAATGCCATTGCCGAAATCGATAAGGCGATATCAAGCCAGCTCGCGGCC
ATCATGCAATCGCCTGAGTTCACCAAGCTCGAAGGCGCCTGGCGCGGCCTGAACTATCTCGTCAAGAACAGCGAGACCAG
CGCCAACCTGAAGATCCGCGTCCTCAATGCATCCAAGCGCGATGTCGCCAAGGATCTGGCAAAGGCCGTCGAATTCGACC
AGTCGCGGCTTTTCAAGTCGGTCTATGAAGACGAATTCGGCACGCCGGGCGGCGAACCGATGGGCGCGCTGATCGGCGAT
TTCGAATTCGACAATTCCTTCGACGACGTCCAGCTGCTGCAGGGCGTCTCGATGATCGCCGCAGCCGCTTTCGCCCCGTT
CATCTCCGCCGCCAGCCCGCGCATGTTCGGCTTCGAGGATTTCCGGGAGCTCGCAAAACCCCGCGATCTCGAGAAGATCT
TCGAGACGGTTGAATACGCCAAGTGGCGCAGCCTGCGTGACAGCGATGATTCCCGCTTCGTGACGCTCGCCATGCCGCGT
GTGCTCGCCCGCATGCCCTATGGCCCGAAGACCAGCCCGATCGAGGAGTTCAACTTCGACGAAACCGGCGGCTCCAAGAC
CGGCGAACTGTCTCACGGTTCCTACTGCTGGATGAACGCAGCCTATGTGATGGGTACGCGTCTCACCGAGGCCTTCGCCA
AGAACGGCTGGTGCACCGCCATTCGCGGGGCGGAAAACGGCGGCAAGGTCGAAGGGCTGCCGATGCACATCTTCTCGAGC
GACGACGGCGATCTGGACCTGAAGTGCCCGACGGAAGTCGGTATCACCGATCGCCGCGATGCCGAACTCGGCAAGCTCGG
CTTCCTGCCGCTTTGCCACTACAAGAACACGGACTATGCCGTGTTCTTCGGGGCGCAGACCGCGCACAAGCCGAAGCTCT
ACGACCGGCCCGAGGCGACTGCGAATGCGGCCGTTTCAGCCCGCCTGCCCTATATGATGGCGACCTCGCGCTTCGCCCAT
TATCTCAAGGTCATGGGCCGCGATAAGATCGGCTCCTTCATGGAAGCGGAAGATTGCGAGGCCTGGCTCAATCGCTGGAT
CTCCAACTATGTCAACGCCAATGACGACGCCGGCGAAGAGTCGCGAGCGAAATATCCGCTGCGCGAGGCAAAAGTCACCG
TACAGGAAATCCCCGGCAGGCCGGGCGCCTACAACGCCGTGGCCTGGATGCGCCCGTGGCTGCAGATGGAGGAATTGACC
ACCTCGCTGCGCATGGTCGCCCGGATTCCCTCGAAGAACTGA

Upstream 100 bases:

>100_bases
GCGCGCTCCATTCCTGAAGAGTCGTTGTCCGGCAGCGGCCCCTTTTGAAGGGAACCCCTCATGCTTCGAGGGCCGCCGCT
TTCGCAAAAAGGATCGATAG

Downstream 100 bases:

>100_bases
TGAAAGCGGGTCCAAGCGCGGCGGGTTGCCGCCGCGCTTGGACCTTGCGTTCGAAACATCTGTGTCAGGTTGACGATGGG
TTCCAGCACTGAATGGCGGC

Product: putative virulence-island/protein involved in nitrogen fixation

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLTITLNNAIAEIDKAISSQLAA
IMQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKRDVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGD
FEFDNSFDDVQLLQGVSMIAAAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
VLARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTAIRGAENGGKVEGLPMHIFSS
DDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYAVFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAH
YLKVMGRDKIGSFMEAEDCEAWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKN

Sequences:

>Translated_493_residues
MTAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLTITLNNAIAEIDKAISSQLAA
IMQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKRDVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGD
FEFDNSFDDVQLLQGVSMIAAAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
VLARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTAIRGAENGGKVEGLPMHIFSS
DDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYAVFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAH
YLKVMGRDKIGSFMEAEDCEAWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKN
>Mature_492_residues
TAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLTITLNNAIAEIDKAISSQLAAI
MQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKRDVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDF
EFDNSFDDVQLLQGVSMIAAAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPRV
LARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTAIRGAENGGKVEGLPMHIFSSD
DGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYAVFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAHY
LKVMGRDKIGSFMEAEDCEAWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELTT
SLRMVARIPSKN

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54955; Mature: 54823

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLT
CCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCEEE
ITLNNAIAEIDKAISSQLAAIMQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKR
EEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCHH
DVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDFEFDNSFDDVQLLQGVSMIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
AAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
HHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
VLARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTA
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEE
IRGAENGGKVEGLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
EECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
VFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAEDCE
EEECCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
TSLRMVARIPSKN
HHHHHHHHCCCCC
>Mature Secondary Structure 
TAETQLQTKEDVGFAPDENLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLT
CCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCEEE
ITLNNAIAEIDKAISSQLAAIMQSPEFTKLEGAWRGLNYLVKNSETSANLKIRVLNASKR
EEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECCCHH
DVAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDFEFDNSFDDVQLLQGVSMIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
AAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
HHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
VLARMPYGPKTSPIEEFNFDETGGSKTGELSHGSYCWMNAAYVMGTRLTEAFAKNGWCTA
HHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEE
IRGAENGGKVEGLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
EECCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
VFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAEDCE
EEECCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
TSLRMVARIPSKN
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA