| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is yeaO [C]
Identifier: 116249125
GI number: 116249125
Start: 494565
End: 494912
Strand: Reverse
Name: yeaO [C]
Synonym: pRL120460
Alternate gene names: 116249125
Gene position: 494912-494565 (Counterclockwise)
Preceding gene: 116249127
Following gene: 116249124
Centisome position: 56.89
GC content: 56.61
Gene sequence:
>348_bases ATGGCCTTGCACATCAAAAGAATCTACGAGCCGAAAGACGACAAGGACGGCACGCGCATCCTGGTCGATCGTCTATGGCC TCGCGGATTGAGCAAGCAGGATGCAGCAGTCGATATCTGGTTGAAGGATATAGCACCAAGCCCGACGCTGCGCCGTTGGT TTGGCCATGATCCCGCCAAATGGATCGAGTTCCAGCGCCGGTATCGGGACGAGTTGGAGAAGAATCCCTCCGCCGTCGAG GAGCTGAAACGCCAGATCCAGCAAGCGGACACGACGCTTCTCTACGCTGCGAAAGACCTACAGCACAATCACGCCATCGT GCTTCAACGCTTCCTCGGCAAAGACTGA
Upstream 100 bases:
>100_bases GAACAGGCCAACACCTGTTCCACCGGCTCCAGCTTGGAACCAAAACCTTGGCACGCGTATTCGTCGAGATTGGCTTTCGA ACTTATGACGGGGTGAGAAA
Downstream 100 bases:
>100_bases CGCGTCGGTGACCGACGTCGATGACACCCGGCCTCCCCGTGTCCGAAATTTCTGGGAACCTTTTCGTCCGAGCTGCATCC AATGCTCGCTTCCGAAGGCA
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine; precorrin-1; Precorrin 2
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MALHIKRIYEPKDDKDGTRILVDRLWPRGLSKQDAAVDIWLKDIAPSPTLRRWFGHDPAKWIEFQRRYRDELEKNPSAVE ELKRQIQQADTTLLYAAKDLQHNHAIVLQRFLGKD
Sequences:
>Translated_115_residues MALHIKRIYEPKDDKDGTRILVDRLWPRGLSKQDAAVDIWLKDIAPSPTLRRWFGHDPAKWIEFQRRYRDELEKNPSAVE ELKRQIQQADTTLLYAAKDLQHNHAIVLQRFLGKD >Mature_114_residues ALHIKRIYEPKDDKDGTRILVDRLWPRGLSKQDAAVDIWLKDIAPSPTLRRWFGHDPAKWIEFQRRYRDELEKNPSAVEE LKRQIQQADTTLLYAAKDLQHNHAIVLQRFLGKD
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yeaO [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=112, Percent_Identity=41.9642857142857, Blast_Score=92, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: 2.1.1.107
Molecular weight: Translated: 13615; Mature: 13484
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHIKRIYEPKDDKDGTRILVDRLWPRGLSKQDAAVDIWLKDIAPSPTLRRWFGHDPAK CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHH WIEFQRRYRDELEKNPSAVEELKRQIQQADTTLLYAAKDLQHNHAIVLQRFLGKD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure ALHIKRIYEPKDDKDGTRILVDRLWPRGLSKQDAAVDIWLKDIAPSPTLRRWFGHDPAK CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHH WIEFQRRYRDELEKNPSAVEELKRQIQQADTTLLYAAKDLQHNHAIVLQRFLGKD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; uroporphyrin III; precorrin-1
Specific reaction: (1) S-adenosyl-L-methionine + uroporphyrin III = S-adenosyl-L-homocysteine + precorrin-1; (2) S-adenosyl-L-methionine + precorrin-1 = S-adenosyl-L-homocysteine + precorrin-2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]