| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is cpO [H]
Identifier: 116249115
GI number: 116249115
Start: 484970
End: 485806
Strand: Reverse
Name: cpO [H]
Synonym: pRL120450
Alternate gene names: 116249115
Gene position: 485806-484970 (Counterclockwise)
Preceding gene: 116249116
Following gene: 116249113
Centisome position: 55.84
GC content: 59.62
Gene sequence:
>837_bases ATGGGCTACATCACCACCAAGGACGGCGTCGAAATCTTCTACAAGGATTGGGGTCCGAAGGATGCCCAGCCGATCGTCTT TCACCACGGCTGGCCGCTCTCGTCGGACGATTGGGATGCGCAGATGCTGTTCTTCCTGGCAAAGGGCTTCCGCGTCGTCG CCCATGACCGCCGTGGCCACGGCCGCTCTGCTCAAGTTTCTGACGGTCACGACATGGACCACTATGCCGCCGATGCCTTC GCCGTGGTCGAAGCGCTCGATCTAAAGAACGCCGTTCATATCGGCCATTCAACCGGCGGCGGGGAAGTCGCTCGCTATGT GGCAAAATATGGCCAGCCTTCCGGGCGCGTCGCCAAGGCCGTTCTGGTTTCCGCCGTTCCGCCGCTGATGCTGAAGACGG AGACAAATCCGGGCGGCCTTCCGATGGAAGTCTTCGACGGCATTCGCAAGGGGGTGGCCGATAACCGCGCACAGCTGTTC GTCGATTTCCCCACCGGTCCGTTCTACGGCTTCAACCGTCCCGACGCGAAGGTCTATCCAGGCGTCATCCAGAATTGGTG GCGGCAGGGCATGATGGGTAGCGCCAAGGCTCATTACGATGGGATCAAGGCCTTTTCCGAGACCGATCAGACGGAAGACC TGAAGGCAATCACTGTTCCGACGCTCGTTATGCACGGCGACGACGATCAGGTCGTGCCCATCGACAACGCTGGCAAGCTG TCCGTCAAACTGGTGCAGAATGGCACCCTCAAGGTCTATCAGGGTTATCCGCACGGCATGCTGACAACGCATGCTGAGGT CCTGAACGCCGACCTCTTGGCATTTATCCAGGCTTAA
Upstream 100 bases:
>100_bases TTCCGGCGCTGCCGCCGCCGCAGCCATGGCACTCCCCACATCTTTCGGGTTTGCTGCCAACATTTCCTCCACCCCCACCT CAATCAAAGGAGACAATAGA
Downstream 100 bases:
>100_bases TTGGACCGTCCGGGTGTGGCTGCCCACGCTGCACCCGGATCCGGCCGAACAAACCCGACCAAGCAGGCTGTCACCAGGAC AGTCCTGAGCGAAGCTGAGC
Product: putative chloroperoxidase
Products: NA
Alternate protein names: Chloride peroxidase; Chloroperoxidase P; CPO-P [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MGYITTKDGVEIFYKDWGPKDAQPIVFHHGWPLSSDDWDAQMLFFLAKGFRVVAHDRRGHGRSAQVSDGHDMDHYAADAF AVVEALDLKNAVHIGHSTGGGEVARYVAKYGQPSGRVAKAVLVSAVPPLMLKTETNPGGLPMEVFDGIRKGVADNRAQLF VDFPTGPFYGFNRPDAKVYPGVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAITVPTLVMHGDDDQVVPIDNAGKL SVKLVQNGTLKVYQGYPHGMLTTHAEVLNADLLAFIQA
Sequences:
>Translated_278_residues MGYITTKDGVEIFYKDWGPKDAQPIVFHHGWPLSSDDWDAQMLFFLAKGFRVVAHDRRGHGRSAQVSDGHDMDHYAADAF AVVEALDLKNAVHIGHSTGGGEVARYVAKYGQPSGRVAKAVLVSAVPPLMLKTETNPGGLPMEVFDGIRKGVADNRAQLF VDFPTGPFYGFNRPDAKVYPGVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAITVPTLVMHGDDDQVVPIDNAGKL SVKLVQNGTLKVYQGYPHGMLTTHAEVLNADLLAFIQA >Mature_277_residues GYITTKDGVEIFYKDWGPKDAQPIVFHHGWPLSSDDWDAQMLFFLAKGFRVVAHDRRGHGRSAQVSDGHDMDHYAADAFA VVEALDLKNAVHIGHSTGGGEVARYVAKYGQPSGRVAKAVLVSAVPPLMLKTETNPGGLPMEVFDGIRKGVADNRAQLFV DFPTGPFYGFNRPDAKVYPGVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAITVPTLVMHGDDDQVVPIDNAGKLS VKLVQNGTLKVYQGYPHGMLTTHAEVLNADLLAFIQA
Specific function: Chlorinates and brominates suitable organic compounds. Involved in the biosynthesis of the antibiotic pyrrolnitrin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =1.11.1.10 [H]
Molecular weight: Translated: 30424; Mature: 30293
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYITTKDGVEIFYKDWGPKDAQPIVFHHGWPLSSDDWDAQMLFFLAKGFRVVAHDRRGH CCEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCC GRSAQVSDGHDMDHYAADAFAVVEALDLKNAVHIGHSTGGGEVARYVAKYGQPSGRVAKA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHH VLVSAVPPLMLKTETNPGGLPMEVFDGIRKGVADNRAQLFVDFPTGPFYGFNRPDAKVYP HHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCC GVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAITVPTLVMHGDDDQVVPIDNAGKL HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCE SVKLVQNGTLKVYQGYPHGMLTTHAEVLNADLLAFIQA EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GYITTKDGVEIFYKDWGPKDAQPIVFHHGWPLSSDDWDAQMLFFLAKGFRVVAHDRRGH CEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCC GRSAQVSDGHDMDHYAADAFAVVEALDLKNAVHIGHSTGGGEVARYVAKYGQPSGRVAKA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHH VLVSAVPPLMLKTETNPGGLPMEVFDGIRKGVADNRAQLFVDFPTGPFYGFNRPDAKVYP HHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCC GVIQNWWRQGMMGSAKAHYDGIKAFSETDQTEDLKAITVPTLVMHGDDDQVVPIDNAGKL HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCE SVKLVQNGTLKVYQGYPHGMLTTHAEVLNADLLAFIQA EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344520; 7632719 [H]