| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
Click here to switch to the map view.
The map label for this gene is 116248989
Identifier: 116248989
GI number: 116248989
Start: 342905
End: 343396
Strand: Direct
Name: 116248989
Synonym: pRL120320
Alternate gene names: NA
Gene position: 342905-343396 (Clockwise)
Preceding gene: 116248987
Following gene: 116248992
Centisome position: 39.41
GC content: 63.21
Gene sequence:
>492_bases ATGGGAAAAACAATTGAGATCCTGACCGGCAAGGCAGAGCTCTGCCGATCGATCATGGGGGCTTTGCCGGACTGGTTTTC AGAACCTGCGGTTATCGAAGCGAGCGCCCAGGCGATCGAAGACCTGCCGGTGTTCGGCTATGTCGAAGCGGATGTCGTGA CCGCGTTGATGGCCCTGAAGCGGCACCCGCCCGGCGCCGTCGAGATCGCGCTGATCGCGACACGACCGGAACATCACGGT CGCGGCGCCGGACGCCATCTCATCGATGCGGCCGAACGTTTCGGCCATGAATCGGGTGCGCGGCTGCTGACGGTCAAGAC GCTCGCCCCGCGAGGCCTCGACGAACCGCAGTTCGAGGCGACGCGGCGTTTCTATGACCGGAACGGCTTTGTGCGGGCGG AGGTCTTTGCAAAGCTCTGGCACGAGGACCATCCATGCCTGTTCATGGTCAAGCCACTCGCCGGCGTCGAGGCAGGTGAG GCTACGCTTTGA
Upstream 100 bases:
>100_bases GGCTCCTTTTTTGAGCTGAAGTACACGATTTGATTGCAGTGTCTATTTTAAGGTGATAACAGGAGTCAAGTTTAAATCGA CCGATCGGAGGCGAGAAAAA
Downstream 100 bases:
>100_bases GACGACGAGACTTTCTGCTTGGCGCGCATTGGCAATAACTGGTGCGCAGGGCACCCGTCTCTGCACGCGGCGGACGATAG GAGCTAGTGGCGCCCCTCCG
Product: putative acetylase
Products: NA
Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase; Vicibactin Acetylase Protein; Acetylase
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGKTIEILTGKAELCRSIMGALPDWFSEPAVIEASAQAIEDLPVFGYVEADVVTALMALKRHPPGAVEIALIATRPEHHG RGAGRHLIDAAERFGHESGARLLTVKTLAPRGLDEPQFEATRRFYDRNGFVRAEVFAKLWHEDHPCLFMVKPLAGVEAGE ATL
Sequences:
>Translated_163_residues MGKTIEILTGKAELCRSIMGALPDWFSEPAVIEASAQAIEDLPVFGYVEADVVTALMALKRHPPGAVEIALIATRPEHHG RGAGRHLIDAAERFGHESGARLLTVKTLAPRGLDEPQFEATRRFYDRNGFVRAEVFAKLWHEDHPCLFMVKPLAGVEAGE ATL >Mature_162_residues GKTIEILTGKAELCRSIMGALPDWFSEPAVIEASAQAIEDLPVFGYVEADVVTALMALKRHPPGAVEIALIATRPEHHGR GAGRHLIDAAERFGHESGARLLTVKTLAPRGLDEPQFEATRRFYDRNGFVRAEVFAKLWHEDHPCLFMVKPLAGVEAGEA TL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17839; Mature: 17708
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTIEILTGKAELCRSIMGALPDWFSEPAVIEASAQAIEDLPVFGYVEADVVTALMALK CCCEEEEEECHHHHHHHHHHHCHHHHCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHH RHPPGAVEIALIATRPEHHGRGAGRHLIDAAERFGHESGARLLTVKTLAPRGLDEPQFEA CCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHH TRRFYDRNGFVRAEVFAKLWHEDHPCLFMVKPLAGVEAGEATL HHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure GKTIEILTGKAELCRSIMGALPDWFSEPAVIEASAQAIEDLPVFGYVEADVVTALMALK CCEEEEEECHHHHHHHHHHHCHHHHCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHH RHPPGAVEIALIATRPEHHGRGAGRHLIDAAERFGHESGARLLTVKTLAPRGLDEPQFEA CCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHH TRRFYDRNGFVRAEVFAKLWHEDHPCLFMVKPLAGVEAGEATL HHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA