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The map label for this gene is yurN [H]

Identifier: 116248922

GI number: 116248922

Start: 263393

End: 264310

Strand: Reverse

Name: yurN [H]

Synonym: pRL120252

Alternate gene names: 116248922

Gene position: 264310-263393 (Counterclockwise)

Preceding gene: 116248923

Following gene: 116248921

Centisome position: 30.38

GC content: 59.04

Gene sequence:

>918_bases
ATGACCGCTTTGGCGTCCGAAGGGGCCACGAGCAAGCGTGGGGTCGGCTTCAACGCCGACGCCACGCTCGGCTTGCTGTT
GGTGTCGCCCATCGTTATCACGATGGCAGCTTTGGTCTTCTACCCGATGGGAAGAACCGTCTGGGACAGCCTGCACAGGG
TCAACCCCATGCAGGCCGGCACGCCATTCGTCGGCCTGGAGAATTACAGCCGAATGCTGTCGGATGGCCAGCTCGCGACG
ACCTGGAGCAACACGCTCACATACGTTGTTCTGGCCGTCGTCGCCGAAACCGTGTTCGGCGTTCTTGCCGCCGCTCTCAT
CAATCAGATCAAGGTCGGGCGGCAGTGGGTGCTCGCAGCAGTGATCTTGCCCTGGGCGCTGCCCGGCGTTGTGAATTCGG
TCATTTGGCTTTGGATTTATCAACCGGGCGCGGGTCTGTTGAACGGCATTCTTTCGGCGCTTGGGCTGCCCTTCGAAAAT
CACGTCTGGTTCAACGATCGCACCAGCGCCATCGTCGCCGTAACAATCGTCCACGTCTGGCGCATGATGCCTTTGACGAT
CGTCATCGTCCTTGCGGCGATGCAGAGTATTCCTGCGCATCTCTATGAGGCTGCGCGGATCGATGGAGCCACGCGCGTTC
AGATGTTCACATTGGTAACCCTTCCGCTGGTTCGCAGTGCGATCGCTGTCGCCATGACGAACGCAACCGTGAATGCTTTC
AATCTCTTCGACGAGGCCTGGGTTCTGGCGGGTGCCAGCCTCGAGACCCGACCGGTGCTCGTCCAGATCTACCTCGAAAC
CTTCCAGAATCTCCGCTTCTCGTATGGCATGGCGCTATCGGTGGTGATCACTCTCGTGTCTCTGCTGATTTCGTTGGTCT
ACGTCCTTCGTGTCTATCGCAACACACGGTTCGACTGA

Upstream 100 bases:

>100_bases
GCGGCGTAAACACCGCGATCAATAGCGCTGCCAAGGGACAGATGAGCGTCGACCAGGCGATGGAGGCTATCGCTGCCGCC
GCCAAGCAGGCGATGGCGCA

Downstream 100 bases:

>100_bases
TGAAATCCACTATTGCCTATCGAATGATGATTTGGGCCGGTGTCGTCGTCCTGTTGATCTGGTCTTTGGGGCCGATCTAC
TGGACCATCGCGAGTTCGGT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTALASEGATSKRGVGFNADATLGLLLVSPIVITMAALVFYPMGRTVWDSLHRVNPMQAGTPFVGLENYSRMLSDGQLAT
TWSNTLTYVVLAVVAETVFGVLAAALINQIKVGRQWVLAAVILPWALPGVVNSVIWLWIYQPGAGLLNGILSALGLPFEN
HVWFNDRTSAIVAVTIVHVWRMMPLTIVIVLAAMQSIPAHLYEAARIDGATRVQMFTLVTLPLVRSAIAVAMTNATVNAF
NLFDEAWVLAGASLETRPVLVQIYLETFQNLRFSYGMALSVVITLVSLLISLVYVLRVYRNTRFD

Sequences:

>Translated_305_residues
MTALASEGATSKRGVGFNADATLGLLLVSPIVITMAALVFYPMGRTVWDSLHRVNPMQAGTPFVGLENYSRMLSDGQLAT
TWSNTLTYVVLAVVAETVFGVLAAALINQIKVGRQWVLAAVILPWALPGVVNSVIWLWIYQPGAGLLNGILSALGLPFEN
HVWFNDRTSAIVAVTIVHVWRMMPLTIVIVLAAMQSIPAHLYEAARIDGATRVQMFTLVTLPLVRSAIAVAMTNATVNAF
NLFDEAWVLAGASLETRPVLVQIYLETFQNLRFSYGMALSVVITLVSLLISLVYVLRVYRNTRFD
>Mature_304_residues
TALASEGATSKRGVGFNADATLGLLLVSPIVITMAALVFYPMGRTVWDSLHRVNPMQAGTPFVGLENYSRMLSDGQLATT
WSNTLTYVVLAVVAETVFGVLAAALINQIKVGRQWVLAAVILPWALPGVVNSVIWLWIYQPGAGLLNGILSALGLPFENH
VWFNDRTSAIVAVTIVHVWRMMPLTIVIVLAAMQSIPAHLYEAARIDGATRVQMFTLVTLPLVRSAIAVAMTNATVNAFN
LFDEAWVLAGASLETRPVLVQIYLETFQNLRFSYGMALSVVITLVSLLISLVYVLRVYRNTRFD

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=28.2229965156794, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1787570, Length=264, Percent_Identity=29.9242424242424, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790465, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33308; Mature: 33177

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALASEGATSKRGVGFNADATLGLLLVSPIVITMAALVFYPMGRTVWDSLHRVNPMQAG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TPFVGLENYSRMLSDGQLATTWSNTLTYVVLAVVAETVFGVLAAALINQIKVGRQWVLAA
CCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILPWALPGVVNSVIWLWIYQPGAGLLNGILSALGLPFENHVWFNDRTSAIVAVTIVHVW
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH
RMMPLTIVIVLAAMQSIPAHLYEAARIDGATRVQMFTLVTLPLVRSAIAVAMTNATVNAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLFDEAWVLAGASLETRPVLVQIYLETFQNLRFSYGMALSVVITLVSLLISLVYVLRVYR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTRFD
HCCCC
>Mature Secondary Structure 
TALASEGATSKRGVGFNADATLGLLLVSPIVITMAALVFYPMGRTVWDSLHRVNPMQAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TPFVGLENYSRMLSDGQLATTWSNTLTYVVLAVVAETVFGVLAAALINQIKVGRQWVLAA
CCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILPWALPGVVNSVIWLWIYQPGAGLLNGILSALGLPFENHVWFNDRTSAIVAVTIVHVW
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHH
RMMPLTIVIVLAAMQSIPAHLYEAARIDGATRVQMFTLVTLPLVRSAIAVAMTNATVNAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLFDEAWVLAGASLETRPVLVQIYLETFQNLRFSYGMALSVVITLVSLLISLVYVLRVYR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTRFD
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]