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The map label for this gene is 116248923

Identifier: 116248923

GI number: 116248923

Start: 264307

End: 265593

Strand: Reverse

Name: 116248923

Synonym: pRL120253

Alternate gene names: NA

Gene position: 265593-264307 (Counterclockwise)

Preceding gene: 116248924

Following gene: 116248922

Centisome position: 30.53

GC content: 58.2

Gene sequence:

>1287_bases
TTGAGCTCAAGAATAATGAAGGATGGGAACATGCATAAATTGATCTTGCCTCTACTTGCATCGGCGGCCTTGGCAATCGC
CGTACCCGCTCTGGGCCAGGACGCCAAGCCGCTTGCCGGTCAGTCGATCACGGTGCTCATGCCATCGCCGCAGGGACCGA
ACATCGCCTCTGACTTCGAGGCCGAAACCGGCATTCACGTTGACCTACAGACCCTGTCGTGGGACGACATCCGCCCGAAG
CTGGTGACAGCCTTGGTTGCCGGTACAGCGCCAGCGGATGTGACCGAATTCGATTGGTCCTGGACCGGTCAGTTCAGCGC
GGCCGGTTGGTATATGCCGCTCAACGACGTGATCGACGCCGATACGGTGAAAGATATCGGCGTTGCCAAGATCTTCACGG
TTGACGGCAAACTATTGGGAATTCCCTACACCAACGACTTCCGGGTGATGCTCGTCAACAAGAAGCATTTCACGGATGCA
GGCATCACCGAGATGCCGAAAACATTGGACGCCCTGGTCGCTGCCGCCAAGAAGATCAAGGAAAAAGGCATCGTCGAGTA
TCCGATCGGCCTGCCGGTTTCAGCAACGGAAGGCGCGTCAACGAGCTGGTACCTGCTGACCAAGGCCTTCGGTGGCGAAC
TCTTCGACAAGGACTTCAATCCGCTCTTCACCTCGCCGGATTCGGCTGGTTACAAGGCGCTTGCTTTCGAGTTGATGCTC
CTCAAAGAAGGGCTGGTCGATCCTGCGTCTACCGGCCTGAAAGACAGCCAGATCAATGAGAGCATGTTCGCGCAGGGCAT
CACCAGCATCATGATCTCCGGTGAGCCCGGTCGTCTCGGCCAGATGAACGACCCCAAGCAGTCGAAAGTCGCCGGCCAGG
TAGAAGCGATCCTCGTGCCGACGGCGAGCGGTGAAACGCGCAGTTTCGGCCTTCCGGAAGCGCTGGCTATTCCAAATGTC
TCTCCCAACAAGGAGGCGGCGATCGCTTTCGTCAAATGGTTCACCAGCAAGGACTTCCAGAAAAAGAATGCCGTAAACGG
CTTCCTGCCGACCCGCACGTCGGCGCTTTCCGAACTCAACGAGTCCGGAAAACTGAACAGCGGCGACGCTCTCGTAGCGC
AGTCCAAAACCGTTGAGCCGCTGTTCCCGCAAGGCACGCCGCCTTGGTATCCGCAATTTTCCAGCGGCGTAAACACCGCG
ATCAATAGCGCTGCCAAGGGACAGATGAGCGTCGACCAGGCGATGGAGGCTATCGCTGCCGCCGCCAAGCAGGCGATGGC
GCAATGA

Upstream 100 bases:

>100_bases
CTCCTGGCTGCCGCCCAACTTCTCGACTGGCCGTTAGACGACGGCTGGTTCGGGCAAATCGTGGCCACGGCCGAAGGCGG
TGACTGCGCATCCCAGTGAA

Downstream 100 bases:

>100_bases
CCGCTTTGGCGTCCGAAGGGGCCACGAGCAAGCGTGGGGTCGGCTTCAACGCCGACGCCACGCTCGGCTTGCTGTTGGTG
TCGCCCATCGTTATCACGAT

Product: putative substrate binding component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSSRIMKDGNMHKLILPLLASAALAIAVPALGQDAKPLAGQSITVLMPSPQGPNIASDFEAETGIHVDLQTLSWDDIRPK
LVTALVAGTAPADVTEFDWSWTGQFSAAGWYMPLNDVIDADTVKDIGVAKIFTVDGKLLGIPYTNDFRVMLVNKKHFTDA
GITEMPKTLDALVAAAKKIKEKGIVEYPIGLPVSATEGASTSWYLLTKAFGGELFDKDFNPLFTSPDSAGYKALAFELML
LKEGLVDPASTGLKDSQINESMFAQGITSIMISGEPGRLGQMNDPKQSKVAGQVEAILVPTASGETRSFGLPEALAIPNV
SPNKEAAIAFVKWFTSKDFQKKNAVNGFLPTRTSALSELNESGKLNSGDALVAQSKTVEPLFPQGTPPWYPQFSSGVNTA
INSAAKGQMSVDQAMEAIAAAAKQAMAQ

Sequences:

>Translated_428_residues
MSSRIMKDGNMHKLILPLLASAALAIAVPALGQDAKPLAGQSITVLMPSPQGPNIASDFEAETGIHVDLQTLSWDDIRPK
LVTALVAGTAPADVTEFDWSWTGQFSAAGWYMPLNDVIDADTVKDIGVAKIFTVDGKLLGIPYTNDFRVMLVNKKHFTDA
GITEMPKTLDALVAAAKKIKEKGIVEYPIGLPVSATEGASTSWYLLTKAFGGELFDKDFNPLFTSPDSAGYKALAFELML
LKEGLVDPASTGLKDSQINESMFAQGITSIMISGEPGRLGQMNDPKQSKVAGQVEAILVPTASGETRSFGLPEALAIPNV
SPNKEAAIAFVKWFTSKDFQKKNAVNGFLPTRTSALSELNESGKLNSGDALVAQSKTVEPLFPQGTPPWYPQFSSGVNTA
INSAAKGQMSVDQAMEAIAAAAKQAMAQ
>Mature_427_residues
SSRIMKDGNMHKLILPLLASAALAIAVPALGQDAKPLAGQSITVLMPSPQGPNIASDFEAETGIHVDLQTLSWDDIRPKL
VTALVAGTAPADVTEFDWSWTGQFSAAGWYMPLNDVIDADTVKDIGVAKIFTVDGKLLGIPYTNDFRVMLVNKKHFTDAG
ITEMPKTLDALVAAAKKIKEKGIVEYPIGLPVSATEGASTSWYLLTKAFGGELFDKDFNPLFTSPDSAGYKALAFELMLL
KEGLVDPASTGLKDSQINESMFAQGITSIMISGEPGRLGQMNDPKQSKVAGQVEAILVPTASGETRSFGLPEALAIPNVS
PNKEAAIAFVKWFTSKDFQKKNAVNGFLPTRTSALSELNESGKLNSGDALVAQSKTVEPLFPQGTPPWYPQFSSGVNTAI
NSAAKGQMSVDQAMEAIAAAAKQAMAQ

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45469; Mature: 45338

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRIMKDGNMHKLILPLLASAALAIAVPALGQDAKPLAGQSITVLMPSPQGPNIASDFE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
AETGIHVDLQTLSWDDIRPKLVTALVAGTAPADVTEFDWSWTGQFSAAGWYMPLNDVIDA
CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEECCCHHHHCCC
DTVKDIGVAKIFTVDGKLLGIPYTNDFRVMLVNKKHFTDAGITEMPKTLDALVAAAKKIK
CCHHCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
EKGIVEYPIGLPVSATEGASTSWYLLTKAFGGELFDKDFNPLFTSPDSAGYKALAFELML
HCCCEEECCCCCCCCCCCCCCEEEEEEEHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LKEGLVDPASTGLKDSQINESMFAQGITSIMISGEPGRLGQMNDPKQSKVAGQVEAILVP
HHHCCCCCHHCCCCHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEE
TASGETRSFGLPEALAIPNVSPNKEAAIAFVKWFTSKDFQKKNAVNGFLPTRTSALSELN
CCCCCCCCCCCCHHHCCCCCCCCCHHHEEEEHHHCCCCHHHHCCCCCCCCCHHHHHHHHH
ESGKLNSGDALVAQSKTVEPLFPQGTPPWYPQFSSGVNTAINSAAKGQMSVDQAMEAIAA
HCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHH
AAKQAMAQ
HHHHHHCC
>Mature Secondary Structure 
SSRIMKDGNMHKLILPLLASAALAIAVPALGQDAKPLAGQSITVLMPSPQGPNIASDFE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
AETGIHVDLQTLSWDDIRPKLVTALVAGTAPADVTEFDWSWTGQFSAAGWYMPLNDVIDA
CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCEECCCHHHHCCC
DTVKDIGVAKIFTVDGKLLGIPYTNDFRVMLVNKKHFTDAGITEMPKTLDALVAAAKKIK
CCHHCCCEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
EKGIVEYPIGLPVSATEGASTSWYLLTKAFGGELFDKDFNPLFTSPDSAGYKALAFELML
HCCCEEECCCCCCCCCCCCCCEEEEEEEHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHH
LKEGLVDPASTGLKDSQINESMFAQGITSIMISGEPGRLGQMNDPKQSKVAGQVEAILVP
HHHCCCCCHHCCCCHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEE
TASGETRSFGLPEALAIPNVSPNKEAAIAFVKWFTSKDFQKKNAVNGFLPTRTSALSELN
CCCCCCCCCCCCHHHCCCCCCCCCHHHEEEEHHHCCCCHHHHCCCCCCCCCHHHHHHHHH
ESGKLNSGDALVAQSKTVEPLFPQGTPPWYPQFSSGVNTAINSAAKGQMSVDQAMEAIAA
HCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHHH
AAKQAMAQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]