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The map label for this gene is yurN [H]

Identifier: 116248894

GI number: 116248894

Start: 230948

End: 231886

Strand: Reverse

Name: yurN [H]

Synonym: pRL120224

Alternate gene names: 116248894

Gene position: 231886-230948 (Counterclockwise)

Preceding gene: 116248895

Following gene: 116248893

Centisome position: 26.65

GC content: 61.13

Gene sequence:

>939_bases
ATGGCAATGTCGATGGTGAATTCGGAGGACAGGCGTGGGCCGATCTCTTCGCTGCTGCAGAACAACAATGTGCTCGGCTT
CCTGTTCATGCTGCCGGCGGCGGTGTTCCTCGTCTGCTTTCTCACCTATCCACTGGGGCTCGGCGTCTGGCTCGGCTTCA
CCGATACGAGGATCGGCCGCGACGGCATCTTCATCGGGCTGGAGAACTACCAGTTCCTGATGGACGACAGCGTCTTCTGG
CTGTCGGTCTTCAACACCATTCTCTATACCTCCGTCGCCTCGGTGCTGAAATTCGCGCTTGGCCTCTGGCTGGCGATGCT
GCTCAACCAGCACCTGCCGTTCAAGTCCTTCTTCCGGGCCATCGTGCTGCTTCCCTGGGTCGTGCCGACGGTGCTTTCGG
CGCTGGCCTTCTGGTGGATCTACGATTCCCAATTTTCGATCATCTCCTGGTCGCTGATGCAGCTCGGGCTGATCAGCGGA
CCGATCAACTTCCTCGGCGACCCGATCAATGCGCGCATATCCGTCATCGTCGCCAATGTCTGGCGCGGCATTCCCTTCGT
GGCGATCTCGCTGCTTGCGGGGCTGCAGACGATTCCGGCGTCGCTGCAGGAAGCCGCCTCGCTCGACGGCGCCACGAGCT
GGCAGCGTTTCCGCTACGTGACGCTGCCGATGCTGACGCCGATCATCGCCGTGGTGATGACCTTCTCGGTGCTCTTCACC
TTCACGGATTTCCAGCTCATCTACGTGCTGACCAAGGGCGGACCCGTCAATGCGACACATCTGATGGCGACGCTATCGTT
CCAGCGCGGCATTCCAGGCGGTCAGCTCGGCGAGGGTGCGGCAATCGCTGTCGCCATGGTGCCCTTCCTGCTCGGCGCCA
TCATGTTCAGCTTCTTCGGGCTGCAACGGCGCAAATGGCAACAGGGCGGCCAGGATTAA

Upstream 100 bases:

>100_bases
AAACCGCTACTATCGCGTCTGAGCCGCGCTTCAAAACAAGCGGTGTGCCGGCCCTCGGCATGCCGCAAAGTCCTCTGGGA
GTTCAAGTGCAATCTGGGAG

Downstream 100 bases:

>100_bases
GGCCGGGGTTAGAGCCAAATTGGGTTAGGGAGAGTGATGATGTCGATAAATTCAAACGCCGCCGATCAGGTCGTGACCGA
CAATGCCGAAGGCATGAGCT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAMSMVNSEDRRGPISSLLQNNNVLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGRDGIFIGLENYQFLMDDSVFW
LSVFNTILYTSVASVLKFALGLWLAMLLNQHLPFKSFFRAIVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGLISG
PINFLGDPINARISVIVANVWRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFT
FTDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFGLQRRKWQQGGQD

Sequences:

>Translated_312_residues
MAMSMVNSEDRRGPISSLLQNNNVLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGRDGIFIGLENYQFLMDDSVFW
LSVFNTILYTSVASVLKFALGLWLAMLLNQHLPFKSFFRAIVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGLISG
PINFLGDPINARISVIVANVWRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFT
FTDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFGLQRRKWQQGGQD
>Mature_311_residues
AMSMVNSEDRRGPISSLLQNNNVLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGRDGIFIGLENYQFLMDDSVFWL
SVFNTILYTSVASVLKFALGLWLAMLLNQHLPFKSFFRAIVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGLISGP
INFLGDPINARISVIVANVWRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTF
TDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFGLQRRKWQQGGQD

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=31.3725490196078, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1790465, Length=216, Percent_Identity=31.9444444444444, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789861, Length=265, Percent_Identity=27.9245283018868, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34527; Mature: 34396

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSMVNSEDRRGPISSLLQNNNVLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGR
CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DGIFIGLENYQFLMDDSVFWLSVFNTILYTSVASVLKFALGLWLAMLLNQHLPFKSFFRA
CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGLISGPINFLGDPINARISVIVANV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHH
WRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFT
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHH
FTDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFG
HHCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQRRKWQQGGQD
HHHHHHHCCCCC
>Mature Secondary Structure 
AMSMVNSEDRRGPISSLLQNNNVLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGR
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DGIFIGLENYQFLMDDSVFWLSVFNTILYTSVASVLKFALGLWLAMLLNQHLPFKSFFRA
CCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IVLLPWVVPTVLSALAFWWIYDSQFSIISWSLMQLGLISGPINFLGDPINARISVIVANV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHH
WRGIPFVAISLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFT
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHH
FTDFQLIYVLTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFG
HHCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQRRKWQQGGQD
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]