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The map label for this gene is ycjP [H]

Identifier: 116248893

GI number: 116248893

Start: 230009

End: 230911

Strand: Reverse

Name: ycjP [H]

Synonym: pRL120223

Alternate gene names: 116248893

Gene position: 230911-230009 (Counterclockwise)

Preceding gene: 116248894

Following gene: 116248888

Centisome position: 26.54

GC content: 59.58

Gene sequence:

>903_bases
ATGATGTCGATAAATTCAAACGCCGCCGATCAGGTCGTGACCGACAATGCCGAAGGCATGAGCTATCTGAACCGCCTGCC
GCGGCGGATCGTAATGCTCTACCTGCCGATGGCTGTCTTCGTCGTCGTGCTGCTCTTCCCGTTCTACTGGATGGCGATCA
CCGCGGTGAAGCCGAACGATCAGCTGACCGACTACAGCAACTACAGCCCCTTCTGGGTGGTGGGAGCGACGCTCGATCAC
ATCAAATACCTGTTCCTTGAGACCTCCTATCCGGGCTGGCTGTGGAACACGATGCTGGTCGCGGTCTGCTCCACCTTCCT
CTCGTTGGTGGCCTCGGTCTTCGGCGCCTATGCCATCGAGCGGGTCCGCTTCACAGGGTCACGTTCGGTCGGCCTCGTCA
TCTTCCTCGCCTATCTGGTGCCGCCGTCGATCCTCTTCATCCCGCTTGCCTTCATCGTCTTCAAGCTCGGGATCTACGAC
TCGCGGCTGGCGCTGATCTTCACCTACCCGACCTTCCTCATTCCCTTCTGCACCTGGCTGCTGATGGGTTATTTCCGCTC
GATCCCCTTCGAGCTGGAGGAAAGCGCGCTGGTGGACGGCGCCAACAGATGGCAGATTCTCACCAAGATTATCCTGCCGC
TCGCCGTGCCGGGGCTGATTTCGGCTGGCATCTTCGCCTTCACGCTGTCCTGGAACGAATTCATCTATGCGCTGACGTTC
ATCCAGTCCTCGGAAAACAAAACCATCCCGGTCGGCGTGCTGACCGAACTGGTGCGCGGCGACGTCTTCGAATGGGGGGC
ACTGATGGCGGGCGCATTGTTCGGCTCGCTCCCGGTGGTCATCCTCTACTCGTTCTTCGTGGACTACTACGTCTCGTCGA
TGACCGGGGCGGTGAAGGAGTGA

Upstream 100 bases:

>100_bases
CGCCATCATGTTCAGCTTCTTCGGGCTGCAACGGCGCAAATGGCAACAGGGCGGCCAGGATTAAGGCCGGGGTTAGAGCC
AAATTGGGTTAGGGAGAGTG

Downstream 100 bases:

>100_bases
CGGTCTAGCGCGGACACGCCCCTGCTTTCTACAGCAGTTGCGACTGCTTGTTACCGTGCGCAGGAGGAGGAGTGTCCGCA
AAATGGGATCAGGTGCCTTC

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMSINSNAADQVVTDNAEGMSYLNRLPRRIVMLYLPMAVFVVVLLFPFYWMAITAVKPNDQLTDYSNYSPFWVVGATLDH
IKYLFLETSYPGWLWNTMLVAVCSTFLSLVASVFGAYAIERVRFTGSRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYD
SRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYALTF
IQSSENKTIPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE

Sequences:

>Translated_300_residues
MMSINSNAADQVVTDNAEGMSYLNRLPRRIVMLYLPMAVFVVVLLFPFYWMAITAVKPNDQLTDYSNYSPFWVVGATLDH
IKYLFLETSYPGWLWNTMLVAVCSTFLSLVASVFGAYAIERVRFTGSRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYD
SRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYALTF
IQSSENKTIPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
>Mature_300_residues
MMSINSNAADQVVTDNAEGMSYLNRLPRRIVMLYLPMAVFVVVLLFPFYWMAITAVKPNDQLTDYSNYSPFWVVGATLDH
IKYLFLETSYPGWLWNTMLVAVCSTFLSLVASVFGAYAIERVRFTGSRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYD
SRLALIFTYPTFLIPFCTWLLMGYFRSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYALTF
IQSSENKTIPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=35.7933579335793, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=30.8755760368664, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789860, Length=268, Percent_Identity=24.6268656716418, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787368, Length=197, Percent_Identity=28.9340101522843, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33722; Mature: 33722

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSINSNAADQVVTDNAEGMSYLNRLPRRIVMLYLPMAVFVVVLLFPFYWMAITAVKPND
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
QLTDYSNYSPFWVVGATLDHIKYLFLETSYPGWLWNTMLVAVCSTFLSLVASVFGAYAIE
CCCCCCCCCCEEEECCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRFTGSRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWL
HHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
LMGYFRSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYALTF
HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHH
IQSSENKTIPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
HCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSINSNAADQVVTDNAEGMSYLNRLPRRIVMLYLPMAVFVVVLLFPFYWMAITAVKPND
CCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
QLTDYSNYSPFWVVGATLDHIKYLFLETSYPGWLWNTMLVAVCSTFLSLVASVFGAYAIE
CCCCCCCCCCEEEECCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRFTGSRSVGLVIFLAYLVPPSILFIPLAFIVFKLGIYDSRLALIFTYPTFLIPFCTWL
HHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
LMGYFRSIPFELEESALVDGANRWQILTKIILPLAVPGLISAGIFAFTLSWNEFIYALTF
HHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHH
IQSSENKTIPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE
HCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]