Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116248854

Identifier: 116248854

GI number: 116248854

Start: 187936

End: 189693

Strand: Reverse

Name: 116248854

Synonym: pRL120183

Alternate gene names: NA

Gene position: 189693-187936 (Counterclockwise)

Preceding gene: 116248855

Following gene: 116248851

Centisome position: 21.8

GC content: 58.65

Gene sequence:

>1758_bases
ATGGTCAACCTTCTTGATGGATGGATTTTCTCTGGTACCCCGTACGTGCGCGGCAAGGCTTCGGGCGATGTTGTTGCAAG
CGATCTTGAACTAAGTTTCTGGGGTGGGGTCGATCCCTGGACCGGCGAGGTGATCGATCGGCATCACCCCTTGAGTGGCC
GCTCTCTCAAAGACCATATCCTCGCGATCCCCGGGGGTAGGGGATCCTGCTCTGGAAGTGGCGTGATGTTGGAGCTTTTG
CTGAATGGCAAAGGTCCTAAAGCGATGCTGTTCGAGCGAGAGGAGGATATCCTCACGCTCGGTGTCGTCATCGCCGAGGA
GGTATTCGGTCAATCCATTCCCGTTGTGACGCTCACGCCCGAGAATTTTCGCAAAGTGGTGCGTTCGGCCTTTGTCGAAA
TCGACGGAAACGTGGTCTTCTGTTCGGCCGACGGGTTAGCAACGGACGCCATTCCGGCGCACAGCCAGCACTCTGGCCAT
CTTTTCGGTGACGTCGAATTGTCGGAGCTGGATAGAGCTTATCTGGCAGGTGATCACGGGAAGGCTGCGCAATCGGCGAT
CCGCATAATTCTCAGAATGGCGAAGCTGCAGGGGGCCGCTCAACTGATGGATGTCTCACAGGTCCACGTCGACGGCTGCA
TCTACACCGGACCCGGCTCGCTTTCGTTTGCCGAAAGGTTGCGTGATCTCGGCGGGCGCGTCGTGGTACCGACGACACTC
AACTCGATTTCGGTCGATCATCGACGCTGGCGCTCGCAAGGTATTGATCCCGTTCTGGGCGAACCGGCCAGCAAGCTGGG
TGACGTTTATGTCGAGATGGGCGCGCGGCCGACCTTCACCTGCGCGCCCTATCTGCTCGAGACGGCTCCCAGGATCGGCG
AGCAGGTGGCCTGGGCAGAATCGAATGCCGTCGTCTACGCCAACAGCGTTCTTGGCGCGCGGACAATGAAATATCCGGAC
TTTCTCGACATTTGCATCGCACTCACCGGCCGCGCGCCGCTGGCAGGTCCACACATCGACATCAATCGAAAAGCCGGGCT
CGTCATCAGCGTCGGCAATATCGAGGGCATCGACGATTCCTTCTATCCGCTGCTCGGTTATCACATCGGCACTCTGGCAT
CGAACCTTATCCCTGTTGTCACCGGCCTCGATCAGGCCGATCCAACCAATGATGATCTTAAGGCTTTCGGTGCGGCCTTT
GCGACCGTTTCCAGTGCGCCGATGTTTCACATCGTGGGGGTGACGCCTGAGGCAAAGACGCTGGATGCCGTTGCCCCCGC
AGGCATCAGCATTCCTTCGATCGATCTTCGGCTCGAGGAACTTGCGTCGAGTTGGGAGGAACTCAACAGCGCCGACGAGG
AGCGCGTCGATCTCGTCTCGCTCGGCAATCCGCATTTCTCGCTCAGCGAAATCGAGAGGCTCGCGTCCATGTGTACCGGG
CGAAAGAAGCATGTGGATGTGGCAGTGGTCGTTACCTGCGGCCGCGCAACATACGACAAGGCCAACGAAGCCGGGCTGAT
ACCAGCCCTCGAACATTTCGGGGTGCAGTTCGTGACGGACACATGCTGGTGCATGATCACCGATCCGATTATTCCTACCC
TTGCGAAAACCATACTGACGAACTCGGGCAAATATGCTCATTACGGGCCAGGGATAACCGGTCGACGCTTCTATTTCGGT
GGCATGGCCGCATGCGTTGCGGCTGCATGTAGTGGGGTACATAGCAAGGCGGCGCCCCGCTGGTTGCGGCCGGCCTAG

Upstream 100 bases:

>100_bases
GTTGCTAAGGGACCGGCAATCGGAGGGCCTCTGTTCCTGGATACCGGCCTCTATCTGGATGTGCTTGCTTGCACAGTCAC
CCACCTTCAAAGGCTCACAG

Downstream 100 bases:

>100_bases
TGCTGCCGCTGGAGCAATCATTTTTCCGCTTCTGGCGACCATGGAGCGTGATGTCTTGATCACACCGCCAAAGTTTGAAG
GGTTCAGGTCACGACCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVIDRHHPLSGRSLKDHILAIPGGRGSCSGSGVMLELL
LNGKGPKAMLFEREEDILTLGVVIAEEVFGQSIPVVTLTPENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGH
LFGDVELSELDRAYLAGDHGKAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLSFAERLRDLGGRVVVPTTL
NSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTCAPYLLETAPRIGEQVAWAESNAVVYANSVLGARTMKYPD
FLDICIALTGRAPLAGPHIDINRKAGLVISVGNIEGIDDSFYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAAF
ATVSSAPMFHIVGVTPEAKTLDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDLVSLGNPHFSLSEIERLASMCTG
RKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQFVTDTCWCMITDPIIPTLAKTILTNSGKYAHYGPGITGRRFYFG
GMAACVAAACSGVHSKAAPRWLRPA

Sequences:

>Translated_585_residues
MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVIDRHHPLSGRSLKDHILAIPGGRGSCSGSGVMLELL
LNGKGPKAMLFEREEDILTLGVVIAEEVFGQSIPVVTLTPENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGH
LFGDVELSELDRAYLAGDHGKAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLSFAERLRDLGGRVVVPTTL
NSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTCAPYLLETAPRIGEQVAWAESNAVVYANSVLGARTMKYPD
FLDICIALTGRAPLAGPHIDINRKAGLVISVGNIEGIDDSFYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAAF
ATVSSAPMFHIVGVTPEAKTLDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDLVSLGNPHFSLSEIERLASMCTG
RKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQFVTDTCWCMITDPIIPTLAKTILTNSGKYAHYGPGITGRRFYFG
GMAACVAAACSGVHSKAAPRWLRPA
>Mature_585_residues
MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVIDRHHPLSGRSLKDHILAIPGGRGSCSGSGVMLELL
LNGKGPKAMLFEREEDILTLGVVIAEEVFGQSIPVVTLTPENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGH
LFGDVELSELDRAYLAGDHGKAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLSFAERLRDLGGRVVVPTTL
NSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTCAPYLLETAPRIGEQVAWAESNAVVYANSVLGARTMKYPD
FLDICIALTGRAPLAGPHIDINRKAGLVISVGNIEGIDDSFYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAAF
ATVSSAPMFHIVGVTPEAKTLDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDLVSLGNPHFSLSEIERLASMCTG
RKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQFVTDTCWCMITDPIIPTLAKTILTNSGKYAHYGPGITGRRFYFG
GMAACVAAACSGVHSKAAPRWLRPA

Specific function: Unknown

COG id: COG1679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1421 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007506 [H]

Pfam domain/function: PF04412 DUF521 [H]

EC number: NA

Molecular weight: Translated: 62394; Mature: 62394

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVIDRHHPLSGRSLKDHI
CCCCCCCEEECCCCEEECCCCCCEEEECEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCE
LAIPGGRGSCSGSGVMLELLLNGKGPKAMLFEREEDILTLGVVIAEEVFGQSIPVVTLTP
EEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECC
ENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGHLFGDVELSELDRAYLAGDHG
HHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCC
KAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLSFAERLRDLGGRVVVPTTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCCHHHHHHHHCCCEEEEEECC
NSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTCAPYLLETAPRIGEQVAWAE
CCCCHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCCEEEHHHHHHHHHHHCCCEEEEC
SNAVVYANSVLGARTMKYPDFLDICIALTGRAPLAGPHIDINRKAGLVISVGNIEGIDDS
CCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC
FYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAAFATVSSAPMFHIVGVTPEAKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
LDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDLVSLGNPHFSLSEIERLASMCTG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEEECCCCCCCHHHHHHHHHHHCC
RKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQFVTDTCWCMITDPIIPTLAKTILT
CCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHC
NSGKYAHYGPGITGRRFYFGGMAACVAAACSGVHSKAAPRWLRPA
CCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure
MVNLLDGWIFSGTPYVRGKASGDVVASDLELSFWGGVDPWTGEVIDRHHPLSGRSLKDHI
CCCCCCCEEECCCCEEECCCCCCEEEECEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCE
LAIPGGRGSCSGSGVMLELLLNGKGPKAMLFEREEDILTLGVVIAEEVFGQSIPVVTLTP
EEECCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEECC
ENFRKVVRSAFVEIDGNVVFCSADGLATDAIPAHSQHSGHLFGDVELSELDRAYLAGDHG
HHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCC
KAAQSAIRIILRMAKLQGAAQLMDVSQVHVDGCIYTGPGSLSFAERLRDLGGRVVVPTTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCCHHHHHHHHCCCEEEEEECC
NSISVDHRRWRSQGIDPVLGEPASKLGDVYVEMGARPTFTCAPYLLETAPRIGEQVAWAE
CCCCHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCCEEEHHHHHHHHHHHCCCEEEEC
SNAVVYANSVLGARTMKYPDFLDICIALTGRAPLAGPHIDINRKAGLVISVGNIEGIDDS
CCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC
FYPLLGYHIGTLASNLIPVVTGLDQADPTNDDLKAFGAAFATVSSAPMFHIVGVTPEAKT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
LDAVAPAGISIPSIDLRLEELASSWEELNSADEERVDLVSLGNPHFSLSEIERLASMCTG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEEECCCCCCCHHHHHHHHHHHCC
RKKHVDVAVVVTCGRATYDKANEAGLIPALEHFGVQFVTDTCWCMITDPIIPTLAKTILT
CCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHCCEEEECCCEEEEEECCHHHHHHHHHHC
NSGKYAHYGPGITGRRFYFGGMAACVAAACSGVHSKAAPRWLRPA
CCCCEEEECCCCCCCEEEHHHHHHHHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]