| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248855
Identifier: 116248855
GI number: 116248855
Start: 189876
End: 190223
Strand: Reverse
Name: 116248855
Synonym: pRL120184
Alternate gene names: NA
Gene position: 190223-189876 (Counterclockwise)
Preceding gene: 116248857
Following gene: 116248854
Centisome position: 21.86
GC content: 58.33
Gene sequence:
>348_bases TTGCCTTCCCGTTCAACGAAATCTATATTCCGTTCAACACAGGAGAATCTTATGGGTACCCAACCACCCACTGCTGCGGA AAGCGAAGCGAAAGTCGCGTTGGCCCGCAATAAGCTCGTACTCGAGCAAGCGAAGGCCGTCGGTCTCCTTGGCACGGCGA AGAATACCCGCTTGTCGGGGCGTGTGCCGTCGGAGTTGATCGAGGCAGCCAAGAAGCGTGCCCGTGTTACCTCCGACACC GAGCTGCTGGAATTGGCGCTTTCACGGCTGGCTCTCGAAGACGACTTTGGTCCGCGTCTGGTGGGCCGCAAGGGCCGCAT CCCGACGGATATCGATCTTGGGATTTGA
Upstream 100 bases:
>100_bases GAGCCGACGGCCCCAGAGAATCTCCCAATGTCCCCGTCGTCATTCCCATGATGGTTTGCCGCGAACGCCTGGATCGCAAC CTGCCTACCGCTATTGAACT
Downstream 100 bases:
>100_bases TCTCTCTGAAACCCTCCGGTCACTAAAGCCCCAGAGGCACGTCGCGACGATCGAGCGTAGGCCCGACGAAGATCCTCCAT GGGTTGCTAAGGGACCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAKAVGLLGTAKNTRLSGRVPSELIEAAKKRARVTSDT ELLELALSRLALEDDFGPRLVGRKGRIPTDIDLGI
Sequences:
>Translated_115_residues MPSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAKAVGLLGTAKNTRLSGRVPSELIEAAKKRARVTSDT ELLELALSRLALEDDFGPRLVGRKGRIPTDIDLGI >Mature_114_residues PSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAKAVGLLGTAKNTRLSGRVPSELIEAAKKRARVTSDTE LLELALSRLALEDDFGPRLVGRKGRIPTDIDLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12410; Mature: 12279
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAKAVGLLGTAKNTRLSG CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RVPSELIEAAKKRARVTSDTELLELALSRLALEDDFGPRLVGRKGRIPTDIDLGI CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSRSTKSIFRSTQENLMGTQPPTAAESEAKVALARNKLVLEQAKAVGLLGTAKNTRLSG CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RVPSELIEAAKKRARVTSDTELLELALSRLALEDDFGPRLVGRKGRIPTDIDLGI CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA