The gene/protein map for NC_008378 is currently unavailable.
Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

Click here to switch to the map view.

The map label for this gene is 116248822

Identifier: 116248822

GI number: 116248822

Start: 148803

End: 149093

Strand: Direct

Name: 116248822

Synonym: pRL120148

Alternate gene names: NA

Gene position: 148803-149093 (Clockwise)

Preceding gene: 116248792

Following gene: 116248823

Centisome position: 17.1

GC content: 48.45

Gene sequence:

>291_bases
TTGGAAACCGTCGAGATTTTGTGCATGGCAACGCGAAGTCATAAAATGATCGCATCGATAGATGGCAAAACTCGAAAAGG
AGAGATGAAAGCTCCGGCTCACTATGCGCATTTTTTCGGCGAATACTCGGCAAAACTCGCATATTTCTGCATCAAATGCG
CTTTCCATGCGCAGCTCTCCGCACCGCCAGACCCTTTCGACGGGGAAACGGCCCAGCGGGACAAAAAAGTGCAACCCGCT
CCCCTTCTCGCAGAAAATGCAATTTCGGTATGCAAAAGACATTTATTTTGA

Upstream 100 bases:

>100_bases
GGCAGTCTGACGTTTTTTGTCGTTCACCCCAGGAGTGCTTCTAGCGGCATTCCTATGCTGAATTGATGACATAAATGGTT
TTTGTATTCAATAGGCTTTT

Downstream 100 bases:

>100_bases
CATAGTCCGAAACTGCGAAATACACTAAAGAGAATTTCGATTTTGTTGCCATCCGTGGTTGGATGGAGGATGCCCCGCCC
AATGATACGCAATCTCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAKLAYFCIKCAFHAQLSAPPDPFDGETAQRDKKVQPA
PLLAENAISVCKRHLF

Sequences:

>Translated_96_residues
METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAKLAYFCIKCAFHAQLSAPPDPFDGETAQRDKKVQPA
PLLAENAISVCKRHLF
>Mature_96_residues
METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAKLAYFCIKCAFHAQLSAPPDPFDGETAQRDKKVQPA
PLLAENAISVCKRHLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10714; Mature: 10714

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAKLAYFCIKCAFHAQLS
CCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPDPFDGETAQRDKKVQPAPLLAENAISVCKRHLF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
METVEILCMATRSHKMIASIDGKTRKGEMKAPAHYAHFFGEYSAKLAYFCIKCAFHAQLS
CCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPDPFDGETAQRDKKVQPAPLLAENAISVCKRHLF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA