Click here to switch to the map view.

The map label for this gene is ycsN [H]

Identifier: 116248792

GI number: 116248792

Start: 116168

End: 117097

Strand: Direct

Name: ycsN [H]

Synonym: pRL120118

Alternate gene names: 116248792

Gene position: 116168-117097 (Clockwise)

Preceding gene: 116248791

Following gene: 116248822

Centisome position: 13.35

GC content: 57.42

Gene sequence:

>930_bases
ATGAAAACATACACGCTTCCACAGACCGACCTCAATGTGTCGAGTATCATTCTCGGAATGATGCGGATCTCCAATATGAG
CAATGGCGAAATCCAACAACTTGTCGATGGTGCACGCGATGCCGGCGTGACGTTCTTCGACCATGCGGACGTTTATGGCG
GTGCGCCGCATCGCTGCGAGGCTCGTTTCGGCGAGGCGATCTCCCTCACCGCCGCAGAACGTGAGAAACTTGTCATCCAG
AGCAAGGTCGGAATCCGCGAGGGATTTTTCGATTTCTCCGCCGAGCATATTCTGGCCTCGGTGGATCAGTCGCTCGCAGC
GCTGAAGACCGACTATCTGGACGTGCTTCTGCTGCACCGTCCTGATACGCTTGTCGAGCCCGAAGAGGTTGCTGCGGCCT
TCGACACGCTCAAATCTGCCGGCAAGGTCCGCCATTTCGGTGTTTCAAACCATACACCTGGCCAGGTCGAGCTGCTGAAA
ACCGCGGTCAAGCAACCGCTCATCGTCAATCAGGTACAGCTTAGCATCACGCATGCGCCGCTGATCGCATCGGGCGTTGC
TGCCAACATGGCCGGGCTCGACCAGTCGATCGACCGCGACAACGGTCTCCTCGATTATTCTCGTATCAACGGGATGATGC
TACAGGCCTGGTCGCCTTTCCAGAAGGGCTTCTTCGATGGCGTCTTCCTTGGCGACAACGAGAATTTCGCCGATCTGAAC
GGCGCAATCGACGAACTCGCCAAGGCCTACGGTGTAACGCCGACGGGTATCGCGGTTGCGTGGATCACCCGTCATCCGGC
AAAAATTCAAGTCGTGCTCGGCACCACGAAGCCGGAACGTGTCGTCGAAGCCGCGGCCGGTTCTTCTATCTCGATGACCC
GAGAGGAATGGTATCGCCTCTTCCGAGCTGCGGGACATACTCTGCCCTAA

Upstream 100 bases:

>100_bases
AAAGTGGGAGCGGCCTCTCGCCCGGCGAGCATGCGGCCAATCAAATATGTTACCAGAAGTGAAGTCAGCCAGTTCGCAAC
CTGCATGAGGTTTTACTGAA

Downstream 100 bases:

>100_bases
CCCGCATGCGATGGTGGCGTTCGCGAATGTCGCCATCAAGCCGCGTCCTACTACGGTTTTACAGGACATGGAACATCGCG
AAGATTTCCGCAGATTATCG

Product: putative aldo-keto reductase/oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTFFDHADVYGGAPHRCEARFGEAISLTAAEREKLVIQ
SKVGIREGFFDFSAEHILASVDQSLAALKTDYLDVLLLHRPDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLK
TAVKQPLIVNQVQLSITHAPLIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQKGFFDGVFLGDNENFADLN
GAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERVVEAAAGSSISMTREEWYRLFRAAGHTLP

Sequences:

>Translated_309_residues
MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTFFDHADVYGGAPHRCEARFGEAISLTAAEREKLVIQ
SKVGIREGFFDFSAEHILASVDQSLAALKTDYLDVLLLHRPDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLK
TAVKQPLIVNQVQLSITHAPLIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQKGFFDGVFLGDNENFADLN
GAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERVVEAAAGSSISMTREEWYRLFRAAGHTLP
>Mature_309_residues
MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTFFDHADVYGGAPHRCEARFGEAISLTAAEREKLVIQ
SKVGIREGFFDFSAEHILASVDQSLAALKTDYLDVLLLHRPDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLK
TAVKQPLIVNQVQLSITHAPLIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQKGFFDGVFLGDNENFADLN
GAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERVVEAAAGSSISMTREEWYRLFRAAGHTLP

Specific function: Unknown

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=314, Percent_Identity=38.2165605095541, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789375, Length=277, Percent_Identity=27.7978339350181, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=25, Blast_Score=81, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6320079, Length=282, Percent_Identity=24.822695035461, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33552; Mature: 33552

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTFFDHADVYGGAPHRCE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCEEEECCCCCCCCCCCHH
ARFGEAISLTAAEREKLVIQSKVGIREGFFDFSAEHILASVDQSLAALKTDYLDVLLLHR
HHCCCEEEEEHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLKTAVKQPLIVNQVQLSITHAP
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEHEEEEEECCC
LIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQKGFFDGVFLGDNENFADLN
HHHHHHHHHHHHCHHHCCCCCCCEEHHHHCCEEEECCCHHHHCCCCCEEECCCCCCHHHH
GAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERVVEAAAGSSISMTREEWYRL
HHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHH
FRAAGHTLP
HHHCCCCCC
>Mature Secondary Structure
MKTYTLPQTDLNVSSIILGMMRISNMSNGEIQQLVDGARDAGVTFFDHADVYGGAPHRCE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCEEEECCCCCCCCCCCHH
ARFGEAISLTAAEREKLVIQSKVGIREGFFDFSAEHILASVDQSLAALKTDYLDVLLLHR
HHCCCEEEEEHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDTLVEPEEVAAAFDTLKSAGKVRHFGVSNHTPGQVELLKTAVKQPLIVNQVQLSITHAP
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEHEEEEEECCC
LIASGVAANMAGLDQSIDRDNGLLDYSRINGMMLQAWSPFQKGFFDGVFLGDNENFADLN
HHHHHHHHHHHHCHHHCCCCCCCEEHHHHCCEEEECCCHHHHCCCCCEEECCCCCCHHHH
GAIDELAKAYGVTPTGIAVAWITRHPAKIQVVLGTTKPERVVEAAAGSSISMTREEWYRL
HHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHH
FRAAGHTLP
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]