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The map label for this gene is stbB

Identifier: 116248807

GI number: 116248807

Start: 134847

End: 135260

Strand: Reverse

Name: stbB

Synonym: pRL120133

Alternate gene names: NA

Gene position: 135260-134847 (Counterclockwise)

Preceding gene: 116248808

Following gene: 116248806

Centisome position: 15.55

GC content: 55.8

Gene sequence:

>414_bases
ATGATCCTGTTGGACACCAACGTGATATCGGAGCCGTGGAAACCGATTCCTGACGGAGCAGTGGTCGCTTGGTTGGACGC
CCAAGCCATCGAAACTCTCTTCGTTTCCGCAATAACAATTGCTGAACTACGTTTTGCGATCGCTGCCATGCCCGCAGGCA
AACGGCAAACTATCCTTCGCGATCGCCTGGAGGAAGAAGTGCTTCCGCATTTTGCCGAACGCATCCTGCCTTTCGATCTT
GCCGCCAGCCAATTTTACTCGGAACTGATGGCGCGCGCTCGAGTATCCGGGAAAGGATCAGCAAGGGGACATATCGCAGC
CACCGCCGTAGCGAACGGCCTTGCCGTCGCAACTCGCGACACAGGCCCTTTTGAGGCCGTTGGGTTGAAAGTGATTAACC
CCTGGCTCCCATAA

Upstream 100 bases:

>100_bases
TACTTGCGGCCATCGGTCGTGACGCTGAGCTCTCCAACAGCGACGTTGAAGCCTTGCAGCAAAATCGCAATAAGGCGCCT
GCTGAACCCATGACTTTCGA

Downstream 100 bases:

>100_bases
ACATCAGGTGATTTTAGGTGCCGTCGGTTCTTAAGGCGCCGCCTAAAACGCAGCTTCGGGGCTGATTAGCGTCCAAAACA
GTAACCTGCGCTCGCGCTCG

Product: putative plasmid stability protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRFAIAAMPAGKRQTILRDRLEEEVLPHFAERILPFDL
AASQFYSELMARARVSGKGSARGHIAATAVANGLAVATRDTGPFEAVGLKVINPWLP

Sequences:

>Translated_137_residues
MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRFAIAAMPAGKRQTILRDRLEEEVLPHFAERILPFDL
AASQFYSELMARARVSGKGSARGHIAATAVANGLAVATRDTGPFEAVGLKVINPWLP
>Mature_137_residues
MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRFAIAAMPAGKRQTILRDRLEEEVLPHFAERILPFDL
AASQFYSELMARARVSGKGSARGHIAATAVANGLAVATRDTGPFEAVGLKVINPWLP

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14804; Mature: 14804

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRFAIAAMPAGKRQTILR
CEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DRLEEEVLPHFAERILPFDLAASQFYSELMARARVSGKGSARGHIAATAVANGLAVATRD
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEECC
TGPFEAVGLKVINPWLP
CCCHHHHHHEECCCCCC
>Mature Secondary Structure
MILLDTNVISEPWKPIPDGAVVAWLDAQAIETLFVSAITIAELRFAIAAMPAGKRQTILR
CEEECCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
DRLEEEVLPHFAERILPFDLAASQFYSELMARARVSGKGSARGHIAATAVANGLAVATRD
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEECC
TGPFEAVGLKVINPWLP
CCCHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]