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The map label for this gene is glxA [H]

Identifier: 116248806

GI number: 116248806

Start: 133407

End: 134435

Strand: Reverse

Name: glxA [H]

Synonym: pRL120132

Alternate gene names: 116248806

Gene position: 134435-133407 (Counterclockwise)

Preceding gene: 116248807

Following gene: 116248805

Centisome position: 15.45

GC content: 58.5

Gene sequence:

>1029_bases
ATGTTTGGAGTTCGCCCCATGACGGATCAGACCTATACGCTCAAGCAATTGGCACAGGGGCATCGACCGATCCGGATCGG
CTTTTTCCTGGTGCCGGACTTCCCTCTGATGACCTTTGCGGCGGCGCTCGACTCGTTGCGGCAGGGCAATCGTCTGGCCA
AGCGAAAGGCCTTTGAGTGGCTCATCCTGTCGGCGGATGGCGGCCATGTGAAGTCCAGCAGTGGACTGGGCTTCGATGCA
GATGCGGCAATCGGCAGGGCGCCACGCTGCGATATCGTCATCCTCTGCGCAGGCATCAATTATGCGGACGCCTATGATGC
CAATGTCTTTGCATGGTTGAGGCGCATCCATTCGGAGGGGTGCGTGCTTGGAGCAGTCAGCACTGCCGTCTTCTTCCTGG
CAAAGGCTCGATTGTTGGAAGGGCGACGATGTGCCGTTCATTGGGAGTCGCTTGCAAGCTTTCGCAGCGAGTTTCCGAAC
TGTCTCGCCACCGACGACATTTTCGCGATCGACGGACGTTTTCTGACCTCGTCGGGCGGAACGGTCACATTGGACATGAT
GCTTTACCTCATCTCGGCCGTGGAGGGTCGGGAGTTGGCAGCACTCATTTCGGACCAGTTCAACCACGCGCGCATACGGC
GCCAGGACGACGTTCAGAGGATGTCGCCCGAAGATCGTTTCGGCATCCGGAATGCCAAGCTTGCCTTTGTGGTTCGTCGG
ATGGAAGCCAGCCTCGGCGATCCGGTCGAAATTTCCGATCTCGCCAGTAGCGTGGCGCTTTCGCTTCGGCAGCTCGAGCG
GCTGTTTCACGCCAATTTCGGCAAGAGTCCCACCCATTTCTACATAGAGCTTCGCATGACTCGCGCGAAAGAACTGCTAG
TCTACACGGAATTGGCGATCGGTGAGATCGCCGAAATCTGCGGTTATCAGTCGGCTTCGCATTTCGGCCGCTCATACCGC
ACGCGGTTTCGCGAGAGCCCTGCCGCGACACGAAAGGCAGAGAGACGACGAGAGGTGCCGGTGTCATGA

Upstream 100 bases:

>100_bases
TCCGGCTGACCATGCGGTGACGCTTAGTCGTCGGTGTTTGTGTTTCGTTGCCTGCCTGAGTCCGCCGCTGCTGCGGACCG
GCAAAAGCAGGGCAAACGGG

Downstream 100 bases:

>100_bases
ACAATGTCGATCCGCGCAGAGAAGATGTCGGATCACCGCATGTCACAGAGGTCCATCCCGTTTTAAATTGAACGAAGACG
GATGGGTGACGGACAAAAGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDSLRQGNRLAKRKAFEWLILSADGGHVKSSSGLGFDA
DAAIGRAPRCDIVILCAGINYADAYDANVFAWLRRIHSEGCVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPN
CLATDDIFAIDGRFLTSSGGTVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMSPEDRFGIRNAKLAFVVRR
MEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFYIELRMTRAKELLVYTELAIGEIAEICGYQSASHFGRSYR
TRFRESPAATRKAERRREVPVS

Sequences:

>Translated_342_residues
MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDSLRQGNRLAKRKAFEWLILSADGGHVKSSSGLGFDA
DAAIGRAPRCDIVILCAGINYADAYDANVFAWLRRIHSEGCVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPN
CLATDDIFAIDGRFLTSSGGTVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMSPEDRFGIRNAKLAFVVRR
MEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFYIELRMTRAKELLVYTELAIGEIAEICGYQSASHFGRSYR
TRFRESPAATRKAERRREVPVS
>Mature_342_residues
MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDSLRQGNRLAKRKAFEWLILSADGGHVKSSSGLGFDA
DAAIGRAPRCDIVILCAGINYADAYDANVFAWLRRIHSEGCVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPN
CLATDDIFAIDGRFLTSSGGTVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMSPEDRFGIRNAKLAFVVRR
MEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFYIELRMTRAKELLVYTELAIGEIAEICGYQSASHFGRSYR
TRFRESPAATRKAERRREVPVS

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38222; Mature: 38222

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDSLRQGNRLAKRKAFEW
CCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCEEE
LILSADGGHVKSSSGLGFDADAAIGRAPRCDIVILCAGINYADAYDANVFAWLRRIHSEG
EEEECCCCCEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
CVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPNCLATDDIFAIDGRFLTSSGG
CEEHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCC
TVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMSPEDRFGIRNAKLAFVVRR
EEEHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHHHHH
MEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFYIELRMTRAKELLVYTELAI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHH
GEIAEICGYQSASHFGRSYRTRFRESPAATRKAERRREVPVS
HHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFGVRPMTDQTYTLKQLAQGHRPIRIGFFLVPDFPLMTFAAALDSLRQGNRLAKRKAFEW
CCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCEEE
LILSADGGHVKSSSGLGFDADAAIGRAPRCDIVILCAGINYADAYDANVFAWLRRIHSEG
EEEECCCCCEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
CVLGAVSTAVFFLAKARLLEGRRCAVHWESLASFRSEFPNCLATDDIFAIDGRFLTSSGG
CEEHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEECCEEEECCCC
TVTLDMMLYLISAVEGRELAALISDQFNHARIRRQDDVQRMSPEDRFGIRNAKLAFVVRR
EEEHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCHHHHHHCCCCHHCCCCCHHHHHHHHH
MEASLGDPVEISDLASSVALSLRQLERLFHANFGKSPTHFYIELRMTRAKELLVYTELAI
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHH
GEIAEICGYQSASHFGRSYRTRFRESPAATRKAERRREVPVS
HHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]