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The map label for this gene is ugpE [C]

Identifier: 116248787

GI number: 116248787

Start: 108394

End: 109215

Strand: Direct

Name: ugpE [C]

Synonym: pRL120113

Alternate gene names: 116248787

Gene position: 108394-109215 (Clockwise)

Preceding gene: 116248786

Following gene: 116248788

Centisome position: 12.46

GC content: 58.03

Gene sequence:

>822_bases
ATGATCGGCAAGGCTCCCCGCTGGATTGTCATATTCGTCGGCATCATCGCCTGCATCTGGGTCATCCCAATCGCCGGTAT
CGTTGTTACATCCCTGCGTCCTCCCGAGGGCGTCTCGCTTGGCTGGTGGCACTTCGAGCGCTTCGATCTGACCTTCGATG
CGTGGCACCGTGTCTGGGACAAATATCCGCTCTCCCAATCCATGTGGGTGACGATGAAAACGGCGGGGATTGCGACGGCG
CTGACGATGGTTTTGACGCCGGCAGCGGCCTACGCCTTCCATTTCCTCAATTTCCCGTTCCGCCGCATCTTGCTGATCAT
CATCATCAACGCATTCGTGTTGCCGCAGCAGGTTGTCATCATTCCGCTCTTCACGCTGTGGCGCGATCTCGGGCTGATCG
ACAACATTCTCTCCGTTCTCATTCCCTATGTCGGGATGTCCTTCGCTTGGTCGATCTTCCTCGTCAAAAATTTCTTCGAG
GATTTCCCGCGCGAACTAGTGGAAGCAGCCAAGATTGACGGCTGCGGACCGATTGCGACTTTCCGTCACGTGGTACTGCC
GAACAGCCTGTCGCCGATCTTCGCCGTCGGCATCCTGCAGTTCCTCTGGACCTGGAACGCCTTGCTACTGCCGATGCTTT
TCCTGCGCAACGACGTACCCCTGCCCGTGCTGCTCGCCCGCATCTCCGGCAGCTACGAGATCAATTGGGACCTGCGCTCG
GTGGCGGCGATCATCACGACAATCGTTCCCCTCCTCGTTTTTCTTGTCTTCCAACGTCAGTTCGCCGCCGGCTCTCAAAC
CCGCACCGGCGCAAAGGAATAG

Upstream 100 bases:

>100_bases
AGTTCAAACTGGGCTATGGCGCCGCCGCGACCGTCATCCTGCTGCTGGCCGTGCTCATCGTCTCGATCCCCGCCATCATC
CAGCGAACGGCAGGTGCGAA

Downstream 100 bases:

>100_bases
GACCATGCCGAACACCACAAACAAGCCGTTGCGCTACCGCCAGATCCATCTCGACTTCCATACGTCGGAACATATTCCCG
GCATCGGCGTCGACTTCGAT

Product: putative transmembrane transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHFERFDLTFDAWHRVWDKYPLSQSMWVTMKTAGIATA
LTMVLTPAAAYAFHFLNFPFRRILLIIIINAFVLPQQVVIIPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFE
DFPRELVEAAKIDGCGPIATFRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLPVLLARISGSYEINWDLRS
VAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE

Sequences:

>Translated_273_residues
MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHFERFDLTFDAWHRVWDKYPLSQSMWVTMKTAGIATA
LTMVLTPAAAYAFHFLNFPFRRILLIIIINAFVLPQQVVIIPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFE
DFPRELVEAAKIDGCGPIATFRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLPVLLARISGSYEINWDLRS
VAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE
>Mature_273_residues
MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHFERFDLTFDAWHRVWDKYPLSQSMWVTMKTAGIATA
LTMVLTPAAAYAFHFLNFPFRRILLIIIINAFVLPQQVVIIPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFE
DFPRELVEAAKIDGCGPIATFRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLPVLLARISGSYEINWDLRS
VAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE

Specific function: Probably part of a binding-protein-dependent transport system PH1036/38/39. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=181, Percent_Identity=33.1491712707182, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787571, Length=186, Percent_Identity=25.2688172043011, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790464, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30911; Mature: 30911

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHFERFDLTFDAWHRVWD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECEEEHHHHCCHHHHHHHHHH
KYPLSQSMWVTMKTAGIATALTMVLTPAAAYAFHFLNFPFRRILLIIIINAFVLPQQVVI
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
IPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFEDFPRELVEAAKIDGCGPIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLPVLLARISGSYEINWDLRS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCHHHH
VAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGKAPRWIVIFVGIIACIWVIPIAGIVVTSLRPPEGVSLGWWHFERFDLTFDAWHRVWD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECEEEHHHHCCHHHHHHHHHH
KYPLSQSMWVTMKTAGIATALTMVLTPAAAYAFHFLNFPFRRILLIIIINAFVLPQQVVI
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHH
IPLFTLWRDLGLIDNILSVLIPYVGMSFAWSIFLVKNFFEDFPRELVEAAKIDGCGPIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FRHVVLPNSLSPIFAVGILQFLWTWNALLLPMLFLRNDVPLPVLLARISGSYEINWDLRS
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCHHHH
VAAIITTIVPLLVFLVFQRQFAAGSQTRTGAKE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]