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The map label for this gene is 116248775

Identifier: 116248775

GI number: 116248775

Start: 94634

End: 95914

Strand: Reverse

Name: 116248775

Synonym: pRL120099

Alternate gene names: NA

Gene position: 95914-94634 (Counterclockwise)

Preceding gene: 116248776

Following gene: 116248774

Centisome position: 11.02

GC content: 62.45

Gene sequence:

>1281_bases
ATGTTTACCAGACGCGATTTTCTGAAGACGACGGCCGCCACCGGTGCATTGGCGGTGACCTCAGGGCTCGCCGCCCCTGC
GATTGCGCAGGATGCCGCGATCAAGCTTGGTTATGTCAGCCCGCAGACGGGGCCGCTTGCCGCCTTCGGTGAGGCCGATA
AATTCGTCATCGACAGTTTTCTGGCGACCACCAAGTCGATGGGTCTCAACTATGAGGTCGTCGTCAAGGACAGCCAGTCC
AATCCAAACCGGGCGGCAGAGGTCGCCAAGGAACTGATCGTCACCGACGAGGTAAACCTGATCCTCGTCGCCTCGACGCC
GGAGACCACCAATCCGGTGGCGACCACCTGCGAGGCTGAGGAAATGCCTTGCATTTCGACGGTCGCGCCCTGGCAGCCAT
GGTTCATCGGCCAGCAGGGCAATCCCGGCGACCCCGGCTCATGGAAACCGTTCAACTTCGCCTATCACTTCTTCTGGGGT
CTCGAAGACGTCATCGCGGTCTTCACCAATATGTGGGCGCAGATCGAGACCAATAAGAAGGTCGGCGGCCTGTTCCCCAA
CGATGGCGACGGCAATGCCTGGGGCGACAAGGTCGTCGGCTTCCCGCCGGTGCTGGAAAGGATGGGCTACGGCCTGATCG
ACCCCGGCCGCTACCAGAACATGACGGATGATTTCTCGGCGCAGATCAACGCCTTCAAATCAGGCCAGTGCGAAATCATC
ACCGGCGTGGTGATCCCGCCTGACTTCACCACCTTCTGGAACCAGGCCAAGCAGCAGGGTTTTGCCCCGAAGATCGCCTC
GATCGGCAAGGCGCTGCTCTTCCCGCAGACGGTGGAGGCGCTCGGCAATGCCGGGCACAATCTGTCGTCGGAAGTCTGGT
GGACGCCGAGCCATCCGTTCAAGTCGTCCTTGACCGGGGAAAGTACAGCACAGGTGGCAGACGCCTTCACCAAGGCGACC
AACAGGCCCTGGACGCAGCCGATCGGCTTTGCCCATGCGCTGTTCGAACTGGCGGTGGATGCGATGAAGCGGGCCGGAGA
CCCCACGGACGGGGATGCCGTCGCAGAGGCGATTGCCGCCACCAAGCTCGATACGCTGGTCGGTCCGATCGCCTGGGACG
GCAAGGGCCTGCCGCCGTTTGCCGCCAAGAACATCGCCAAGACGCCGCTCGTCGGCGGCCAGTGGCGGTTGAAGGACGGC
GGCGGCTACGATCTCGTCATCACCGACAACAAGACGGCGCCGAACATTCCGGTCGGCGGCAAAATGGAAGCGATCGCCTG
A

Upstream 100 bases:

>100_bases
CGCGCCCTGCTGCAGGATGCCTGGGAGGGCACGCGGCCGGCATAGGTTGACGACAGACATCACGCTCTCTGGGAGGAGAG
AAAAAATGGGAGGAGGAAAC

Downstream 100 bases:

>100_bases
TTTTTGGCGCGGGGCCTGCTAGGGGCCCCGCCTATTCTGGGAGGAATGGGTTTGGCAATTCTCGAACTCGATGGGGTCTC
GAAGAAATTCGGCGCATTGA

Product: putative substrate-binding component of ABC transporter

Products: NA

Alternate protein names: Tat Pathway Signal Sequence Domain Protein; ABC-Type Branched-Chain Amino Acid Transport Systems

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGPLAAFGEADKFVIDSFLATTKSMGLNYEVVVKDSQS
NPNRAAEVAKELIVTDEVNLILVASTPETTNPVATTCEAEEMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWG
LEDVIAVFTNMWAQIETNKKVGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMTDDFSAQINAFKSGQCEII
TGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEALGNAGHNLSSEVWWTPSHPFKSSLTGESTAQVADAFTKAT
NRPWTQPIGFAHALFELAVDAMKRAGDPTDGDAVAEAIAATKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKDG
GGYDLVITDNKTAPNIPVGGKMEAIA

Sequences:

>Translated_426_residues
MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGPLAAFGEADKFVIDSFLATTKSMGLNYEVVVKDSQS
NPNRAAEVAKELIVTDEVNLILVASTPETTNPVATTCEAEEMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWG
LEDVIAVFTNMWAQIETNKKVGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMTDDFSAQINAFKSGQCEII
TGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEALGNAGHNLSSEVWWTPSHPFKSSLTGESTAQVADAFTKAT
NRPWTQPIGFAHALFELAVDAMKRAGDPTDGDAVAEAIAATKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKDG
GGYDLVITDNKTAPNIPVGGKMEAIA
>Mature_426_residues
MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGPLAAFGEADKFVIDSFLATTKSMGLNYEVVVKDSQS
NPNRAAEVAKELIVTDEVNLILVASTPETTNPVATTCEAEEMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWG
LEDVIAVFTNMWAQIETNKKVGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMTDDFSAQINAFKSGQCEII
TGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEALGNAGHNLSSEVWWTPSHPFKSSLTGESTAQVADAFTKAT
NRPWTQPIGFAHALFELAVDAMKRAGDPTDGDAVAEAIAATKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKDG
GGYDLVITDNKTAPNIPVGGKMEAIA

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45457; Mature: 45457

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGPLAAFGEADKFVIDSF
CCCHHHHHHHHHCCCHHHHHCCCCCCHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHH
LATTKSMGLNYEVVVKDSQSNPNRAAEVAKELIVTDEVNLILVASTPETTNPVATTCEAE
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEECCCCC
EMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWGLEDVIAVFTNMWAQIETNKK
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCC
VGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMTDDFSAQINAFKSGQCEII
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEE
TGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEALGNAGHNLSSEVWWTPSHPF
EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEECCCCCC
KSSLTGESTAQVADAFTKATNRPWTQPIGFAHALFELAVDAMKRAGDPTDGDAVAEAIAA
HHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKDGGGYDLVITDNKTAPNIPVGG
HHHHHHHCCEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC
KMEAIA
CCCCCC
>Mature Secondary Structure
MFTRRDFLKTTAATGALAVTSGLAAPAIAQDAAIKLGYVSPQTGPLAAFGEADKFVIDSF
CCCHHHHHHHHHCCCHHHHHCCCCCCHHHCCCEEEEEECCCCCCCEEECCCCHHHHHHHH
LATTKSMGLNYEVVVKDSQSNPNRAAEVAKELIVTDEVNLILVASTPETTNPVATTCEAE
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHEECCCCEEEEECCCCCCCCCEECCCCC
EMPCISTVAPWQPWFIGQQGNPGDPGSWKPFNFAYHFFWGLEDVIAVFTNMWAQIETNKK
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCC
VGGLFPNDGDGNAWGDKVVGFPPVLERMGYGLIDPGRYQNMTDDFSAQINAFKSGQCEII
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEE
TGVVIPPDFTTFWNQAKQQGFAPKIASIGKALLFPQTVEALGNAGHNLSSEVWWTPSHPF
EEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCEEECCCCCC
KSSLTGESTAQVADAFTKATNRPWTQPIGFAHALFELAVDAMKRAGDPTDGDAVAEAIAA
HHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TKLDTLVGPIAWDGKGLPPFAAKNIAKTPLVGGQWRLKDGGGYDLVITDNKTAPNIPVGG
HHHHHHHCCEEECCCCCCCHHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCC
KMEAIA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA