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The map label for this gene is chqB [H]

Identifier: 116248769

GI number: 116248769

Start: 88560

End: 89444

Strand: Reverse

Name: chqB [H]

Synonym: pRL120093

Alternate gene names: 116248769

Gene position: 89444-88560 (Counterclockwise)

Preceding gene: 116248770

Following gene: 116248763

Centisome position: 10.28

GC content: 60.56

Gene sequence:

>885_bases
ATGGACGCGCATGAGAAAGGCTTCTTCACCGAAGAGATCTCCGTCGAGGTCGTCACCGGCCGCAACAAGAATGCCAAGGA
CGAGCGGCTGAAGCAGATCATGGAAGTGATTACCCGCAAGCTGCATGAGGCGGTGAAGGAGATCGAACCGACCCAGGACG
AATGGATGCAGGCGATCCTGTTTCTGACGCGCACCGGCCAGATGTGCAACGAATGGCGGCAGGAGTTCATCCTGCTGTCG
GACGTTCTCGGCGTCTCGATGCTGGTGGATGCGATCAACAACCGCAAGCCGTCGGGCGCATCCGAAAGCACGGTGCTCGG
TCCCTTCCATGTCGAGGGTGCGCCGGAACTGGCGATGGGCGCCAATATCTGCCTCGATGCCAAGGGCGAGGACATGGTGA
TCGGCGGGCGGATCCTCGATACGGCGGGGCAACCCATCAAGGATGCGGTTATCGACGTCTGGCAGGCCAATGACGAGGGC
TTCTACGACGTGCAGCAGCAGGGGATCCAACCAGACTTCAACCTTCGCGGCGTTTTCCGCACCGGTGCCGACGGCCGCTA
TTGGTTTCGAGCGGTCAAGCCCAAGTATTACCCGATCCCGGACGACGGACCCGTTGGCAAGCTGCTCGGCGCGCTCGGTC
GCCATCCCTACCGGCCCGCCCACCTGCACTATATCATCAAGGCCCACGGCTTCGAGACGCTCACGACACACATCTTCGAT
CCGGACGACCCGTACATCCAATCTGACGCCGTCTTCGGCGTGAAGGAGAGCTTGCTTGCCAAGTTCCAGCACGTTGAGGA
TTCGGTACGCGCTAACGAGCTCAGTTTCTCTGGCAAGTTCTGGCAGATAGAGCACGATTTCGTGCTGGCTCGGCCCGAGG
AGTAG

Upstream 100 bases:

>100_bases
CCCGACCACCACGTCGCCTGGCGGCGCGAGGCGATGGTCGACGATCCGACGACTGAACTGCGCCGCGCGCTGACAGCAAT
TCTTGGAAAGTGAGGCCGTG

Downstream 100 bases:

>100_bases
CATGCTCGCCAGCCGGCGTTCTAACGAAGAAGGCCGTTATAGCCGATGCAATGGAGATGATCGCGCCACAAAGGAACGCG
GCTCGAATTCCGTCAGTCAT

Product: putative dioxygenase

Products: NA

Alternate protein names: 1,2-HQD [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAVKEIEPTQDEWMQAILFLTRTGQMCNEWRQEFILLS
DVLGVSMLVDAINNRKPSGASESTVLGPFHVEGAPELAMGANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEG
FYDVQQQGIQPDFNLRGVFRTGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHLHYIIKAHGFETLTTHIFD
PDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFWQIEHDFVLARPEE

Sequences:

>Translated_294_residues
MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAVKEIEPTQDEWMQAILFLTRTGQMCNEWRQEFILLS
DVLGVSMLVDAINNRKPSGASESTVLGPFHVEGAPELAMGANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEG
FYDVQQQGIQPDFNLRGVFRTGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHLHYIIKAHGFETLTTHIFD
PDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFWQIEHDFVLARPEE
>Mature_294_residues
MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAVKEIEPTQDEWMQAILFLTRTGQMCNEWRQEFILLS
DVLGVSMLVDAINNRKPSGASESTVLGPFHVEGAPELAMGANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEG
FYDVQQQGIQPDFNLRGVFRTGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHLHYIIKAHGFETLTTHIFD
PDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFWQIEHDFVLARPEE

Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007535
- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]

EC number: =1.13.11.37 [H]

Molecular weight: Translated: 33169; Mature: 33169

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAVKEIEPTQDEWMQAIL
CCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FLTRTGQMCNEWRQEFILLSDVLGVSMLVDAINNRKPSGASESTVLGPFHVEGAPELAMG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEECCCCCCHHCC
ANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEGFYDVQQQGIQPDFNLRGVFR
CCEEEECCCCEEEECCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEE
TGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHLHYIIKAHGFETLTTHIFD
CCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCHHEEEEEEECCCEEEEEEEEC
PDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFWQIEHDFVLARPEE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEECCCC
>Mature Secondary Structure
MDAHEKGFFTEEISVEVVTGRNKNAKDERLKQIMEVITRKLHEAVKEIEPTQDEWMQAIL
CCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FLTRTGQMCNEWRQEFILLSDVLGVSMLVDAINNRKPSGASESTVLGPFHVEGAPELAMG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEECCCCCCHHCC
ANICLDAKGEDMVIGGRILDTAGQPIKDAVIDVWQANDEGFYDVQQQGIQPDFNLRGVFR
CCEEEECCCCEEEECCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEEE
TGADGRYWFRAVKPKYYPIPDDGPVGKLLGALGRHPYRPAHLHYIIKAHGFETLTTHIFD
CCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCCCCHHEEEEEEECCCEEEEEEEEC
PDDPYIQSDAVFGVKESLLAKFQHVEDSVRANELSFSGKFWQIEHDFVLARPEE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141483 [H]