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The map label for this gene is stbC

Identifier: 116248751

GI number: 116248751

Start: 76413

End: 76667

Strand: Direct

Name: stbC

Synonym: pRL120075

Alternate gene names: NA

Gene position: 76413-76667 (Clockwise)

Preceding gene: 116248750

Following gene: 116248752

Centisome position: 8.78

GC content: 61.57

Gene sequence:

>255_bases
ATGCCCGCAGTCACAATCAGAAACCTCTCCGAGGCGACGCACCGTGCTCTCAAGGTGCGTGCGGCTCATCACGGGCGCAG
CGCCGAAGCGGAAATGCGGGAAATCCTCGAGGCTGCCGTGCGTCCAGAAACGCGGCTTCGTCTTGGTAGCGCACTCGCCG
AACGGAGCCGCCGCCTCGGACTGACGAATGAGGACTTTGCCGTTCTGGACCAAGCTCGCGACACATTGCCTGCAAAGCCG
ATGAGCTTTGAATGA

Upstream 100 bases:

>100_bases
CCTCCAGCGGCACGGTATCGGGTACATGCAACGCGCATTGAAGAGTGATGGCAGATCAATTATATTGCTAGCATCGCTAT
CATCTCGTAAAGTTGCTATC

Downstream 100 bases:

>100_bases
TTATCCTCGATACGAACGTTGTTTCCGAGGCGATGAAACCCACGCCCGACGAAGCCGTGAAATTCTGGCTCGATGAGCAG
GCAGCCGAAACCCTGTTCCT

Product: putative plasmid stability protein StbC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MPAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETRLRLGSALAERSRRLGLTNEDFAVLDQARDTLPAKP
MSFE

Sequences:

>Translated_84_residues
MPAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETRLRLGSALAERSRRLGLTNEDFAVLDQARDTLPAKP
MSFE
>Mature_83_residues
PAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETRLRLGSALAERSRRLGLTNEDFAVLDQARDTLPAKPM
SFE

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG4691

COG function: function code R; Plasmid stability protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To P.syringae pv tomato plasmid stability protein stbC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR010985 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9362; Mature: 9231

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETRLRLGSALAERSRRLG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
LTNEDFAVLDQARDTLPAKPMSFE
CCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PAVTIRNLSEATHRALKVRAAHHGRSAEAEMREILEAAVRPETRLRLGSALAERSRRLG
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
LTNEDFAVLDQARDTLPAKPMSFE
CCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]