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The map label for this gene is rpe [H]

Identifier: 116248709

GI number: 116248709

Start: 32000

End: 32701

Strand: Direct

Name: rpe [H]

Synonym: pRL120033

Alternate gene names: 116248709

Gene position: 32000-32701 (Clockwise)

Preceding gene: 116248708

Following gene: 116248710

Centisome position: 3.68

GC content: 62.54

Gene sequence:

>702_bases
ATGACGACCCCCTCCAAGTCCTGGATCGCCGATCTTCCGAAGGATCGCCTGATTGCTGAATTCTCCGTCTGGTCGGCCGA
TCTCGTACGTCTGGCGGATGATCTGGCGCGTGTCGATCGTCACGTCGACGTCCTACACATCGATGTCGCCGATGGCCATT
TCGCGCCGGCCATGTTGTTTTTCCCCGATCTTGTTGCCGGTGTGCGCAAAGTGTCCGCGCGCCCGATCCATGTTCACCTG
ATGGTCTCTGACAGCATCCTCCTGTCGCAGATCGAGCAGTTCGCCGATGCGGGCAGCGACCTGATCAGTCTTCATGTTGA
AAACGAAAGCGTCGCCGCCGAGGCGCTCGATCTTCTCGATCGCCGCGGTGTCGCAGCCGGCATGGTGCTCAAGGTCGACA
CTCCTGTCGAACGCGTCGAGAAATATGCGTCCCGGTTGCGCTTTGTGACGCTGCTCGGCACGGCGATCGGCGTGAAGGGC
CAGGGTCTCGACGAAAAAGCCGGAGCGCGGCTTCAGCAGGCAAAGCAGATCATCGCCGGTTGCGGTGCGGCGCATCGGAT
CGTGCTGGCGGCGGACGGCGGTATTCGCGAGCACACCGTGCCTCTTCTGCGCCAGTCGGGCGCGGAGACGGTGGTCCTCG
GTTCCCTGGCTTTCAATGCGCCGTCGCTCGACGAGCGGATGGCATGGGTGCGCGCACTCTAA

Upstream 100 bases:

>100_bases
GCGCGTTTCGTGCAGATCACGCCGAAGACCAAGAGCCGCCCGCAATACGTCGCCGACTTCCGGCTTGCCATGGGTAATTT
TCTGAAGGAGCTCTGAAACA

Downstream 100 bases:

>100_bases
CTCATGGTCTTCACATGCAGCAGGTTGCCATTGGAATCGACCTCGGCGGGACGCAGGTGCGCGCTGCCCTCGTCGACGAG
CAGGGCAGGATCCTTGCCCG

Product: putative D-allulose-6-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVLHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL
MVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKG
QGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL

Sequences:

>Translated_233_residues
MTTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVLHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL
MVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKG
QGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL
>Mature_232_residues
TTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVLHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHLM
VSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKGQ
GLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL

Specific function: D-ALLOSE METABOLISM. ESSENTIAL FOR THIS PATHWAY. [C]

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=197, Percent_Identity=25.8883248730964, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1790523, Length=213, Percent_Identity=30.5164319248826, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789788, Length=223, Percent_Identity=30.0448430493274, Blast_Score=91, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17552948, Length=216, Percent_Identity=27.3148148148148, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322341, Length=213, Percent_Identity=23.943661971831, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24586301, Length=196, Percent_Identity=27.5510204081633, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 25135; Mature: 25004

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVLHIDVADGHFAPAMLF
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
FPDLVAGVRKVSARPIHVHLMVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLD
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
RRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAG
HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
CGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL
CCCHHEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TTPSKSWIADLPKDRLIAEFSVWSADLVRLADDLARVDRHVDVLHIDVADGHFAPAMLF
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH
FPDLVAGVRKVSARPIHVHLMVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLD
HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHH
RRGVAAGMVLKVDTPVERVEKYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAG
HCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
CGAAHRIVLAADGGIREHTVPLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL
CCCHHEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]