| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is glcK [H]
Identifier: 116248710
GI number: 116248710
Start: 32716
End: 33681
Strand: Direct
Name: glcK [H]
Synonym: pRL120034
Alternate gene names: 116248710
Gene position: 32716-33681 (Clockwise)
Preceding gene: 116248709
Following gene: 116248711
Centisome position: 3.76
GC content: 63.15
Gene sequence:
>966_bases ATGCAGCAGGTTGCCATTGGAATCGACCTCGGCGGGACGCAGGTGCGCGCTGCCCTCGTCGACGAGCAGGGCAGGATCCT TGCCCGCGCAGCCGAACCGACGGATGCGCTGGCAGGCCCCGACCGGGTGCTCGCCCAAATCTGCGGCCTGACCGATGGAC TGCTTGCAGCATCAAATCCTGCTTCGGTGGTGGGCGTCGGCGTATCCGCTCCAGGCCCGCTCGATACGGTCGCCGGTGTC GCCTCGAATATCCCGACCCTCTCCGGCTTTGTCGACTTTCCGCTGAAGGCGGAGTTGCAGAAGCGGTTTCCGTTTCCGGT CGACCTCGAGAATGATGCAATAGCCGCTGCCATCGGCGAGTGGCAGTTCGGAGCCGGCAAGGGCCTGGATAATCTGGTCT ATGTCACCGTGAGCACCGGCATTGGCGGTGGCGTTGTGTCGGATGGTCGCGTCGTGCGCGGCCGCAAGGGCATGGCAGCC CATGTCGGGCACATGTCGGTCGTGCCGAACGGAGAGCTTTGTCCCTGCGGCAACCGGGGTTGTTTCGAGGCCTACGGATC CGGAACGGCTTTTGCGCGCCGCGCCCAAATGAGGGCGATGGAAACCAGCGGGACGACGATCGGCAGCGACGGCGGCGCCA TTGACAGCCGCGGCGTTTTCGCGGCCGCAAGGGATGGCGATCGTCTTGCAAATCAACTGGTTGACGAGGAAGCGGAAATT CTCGGTCGCGGCTTCACCAGCCTGATCCATATCTTCAGTCCGGATATCATCGTGATGGGAGGCGGGCTTTCCCACGAGTT CGATCGTCTACAACCCGGCATTCAAGCCTACATCACGCAATGGGCAATGCCGGCATTCAGGGATGTCAAAGTGGTGCTGG CGGCGTTGGATCAGAACTCGGGCCTCGTCGGCGCCGCGGCTCTGGCGTTTCTGACCGGCAAGGTCCCTGCGATCGATCAG CTTTAG
Upstream 100 bases:
>100_bases CGGGCGCGGAGACGGTGGTCCTCGGTTCCCTGGCTTTCAATGCGCCGTCGCTCGACGAGCGGATGGCATGGGTGCGCGCA CTCTAACTCATGGTCTTCAC
Downstream 100 bases:
>100_bases AAAAGCAGGCCGATCCTGCGTGCGTCGGTAAACGCGCTAGAGCATGATGCCGAAAAGTGTGCGCGGTTTTCGGACGACAT CCTGATCTATTTCTTTGATT
Product: putative glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLAQICGLTDGLLAASNPASVVGVGVSAPGPLDTVAGV ASNIPTLSGFVDFPLKAELQKRFPFPVDLENDAIAAAIGEWQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAA HVGHMSVVPNGELCPCGNRGCFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAAARDGDRLANQLVDEEAEI LGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQWAMPAFRDVKVVLAALDQNSGLVGAAALAFLTGKVPAIDQ L
Sequences:
>Translated_321_residues MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLAQICGLTDGLLAASNPASVVGVGVSAPGPLDTVAGV ASNIPTLSGFVDFPLKAELQKRFPFPVDLENDAIAAAIGEWQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAA HVGHMSVVPNGELCPCGNRGCFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAAARDGDRLANQLVDEEAEI LGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQWAMPAFRDVKVVLAALDQNSGLVGAAALAFLTGKVPAIDQ L >Mature_321_residues MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLAQICGLTDGLLAASNPASVVGVGVSAPGPLDTVAGV ASNIPTLSGFVDFPLKAELQKRFPFPVDLENDAIAAAIGEWQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAA HVGHMSVVPNGELCPCGNRGCFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAAARDGDRLANQLVDEEAEI LGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQWAMPAFRDVKVVLAALDQNSGLVGAAALAFLTGKVPAIDQ L
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566325, Length=270, Percent_Identity=29.6296296296296, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI298566315, Length=270, Percent_Identity=29.6296296296296, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI4885285, Length=270, Percent_Identity=29.6296296296296, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI190014632, Length=270, Percent_Identity=29.6296296296296, Blast_Score=107, Evalue=1e-23, Organism=Escherichia coli, GI1786891, Length=313, Percent_Identity=28.7539936102236, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787878, Length=246, Percent_Identity=28.8617886178862, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI87082230, Length=277, Percent_Identity=33.5740072202166, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI87081733, Length=312, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787363, Length=320, Percent_Identity=26.875, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87082127, Length=203, Percent_Identity=23.6453201970443, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33009; Mature: 33009
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLAQICGLTDGLLAASNP CCEEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCEECCCC ASVVGVGVSAPGPLDTVAGVASNIPTLSGFVDFPLKAELQKRFPFPVDLENDAIAAAIGE CEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCEEEEECC WQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAAHVGHMSVVPNGELCPCGNRG CCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEECCEEEECCCCCCCCCCCCC CFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAAARDGDRLANQLVDEEAEI CHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH LGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQWAMPAFRDVKVVLAALDQNS HHCCHHHHHHHHCCCEEEECCCCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GLVGAAALAFLTGKVPAIDQL CCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQQVAIGIDLGGTQVRAALVDEQGRILARAAEPTDALAGPDRVLAQICGLTDGLLAASNP CCEEEEEEECCCCEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCEECCCC ASVVGVGVSAPGPLDTVAGVASNIPTLSGFVDFPLKAELQKRFPFPVDLENDAIAAAIGE CEEEEECCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHCCCCCCCCCCCCEEEEECC WQFGAGKGLDNLVYVTVSTGIGGGVVSDGRVVRGRKGMAAHVGHMSVVPNGELCPCGNRG CCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCEEECCEEEECCCCCCCCCCCCC CFEAYGSGTAFARRAQMRAMETSGTTIGSDGGAIDSRGVFAAARDGDRLANQLVDEEAEI CHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH LGRGFTSLIHIFSPDIIVMGGGLSHEFDRLQPGIQAYITQWAMPAFRDVKVVLAALDQNS HHCCHHHHHHHHCCCEEEECCCCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC GLVGAAALAFLTGKVPAIDQL CCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]