| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248708
Identifier: 116248708
GI number: 116248708
Start: 31186
End: 31995
Strand: Direct
Name: 116248708
Synonym: pRL120032
Alternate gene names: NA
Gene position: 31186-31995 (Clockwise)
Preceding gene: 116248707
Following gene: 116248709
Centisome position: 3.58
GC content: 61.73
Gene sequence:
>810_bases ATGAGACGGGCTGAACCGTTCGAAACCAGCGACGGGACCATTCTCAACGTCGATATGGCGGGCGAGGGCGCGTCCATAAT CTTCCAGCACGGCTTATGCGGCGACGCGGCGCAGACCGATGAAGCCTTTCCGCTTGAAGCGGGTTTTCGCCGGGTCACGA TCGAAGCGCGCGGCCACGGCCATTCCCAAGCCGGCAATCCGGAGCAGTTGTCGATCGCGACCTTCTGCGATGATATCGCC GCCTATATCGAGAAGAGCCTTACGCCGCCGATGGTGATCGGCGGCATCTCGATGGGCGCGGCGATCGCTTTGCGTCTCGC GGTCAAGCGGCCCGATCTTGTCAAGGCACTGATCATCGCAAGGCCTGCCTGGCTGACGGCATCCGCGCCGGAGAATATGT CACCCAACGCCGAAGTCGGGCATCTTCTGAAAACTCTGCCGCCGGATCACGCAAAGGCCGCATTCCTTGCCGGGCCGGTG GGCGTGCGGCTCGCCGCCGAGGCTCCGGACAATCTGGCCTCGCTTGCCGGTTTTTTCTCCCGCACGCCTTTGGATGTGAC CGCCGAACTGCTCACCAGAATTTCCAATGACGGTCCTGATGTGACCGACCAGGACGTCGGCAATCTCACCGTACCGACGC TGGTTATCGGCCATGATCGGGACAGCATTCATCCTCTCAGCCATGCGCGTGCTCTTGCCGAGCGAATTGCCGGCGCGCGT TTCGTGCAGATCACGCCGAAGACCAAGAGCCGCCCGCAATACGTCGCCGACTTCCGGCTTGCCATGGGTAATTTTCTGAA GGAGCTCTGA
Upstream 100 bases:
>100_bases AGGGCAGTCTCGTCACGCATGGTCTTTCGGCCTCGGAGGCGGCTGGTGTGGCGGCCTTCCTGAAGAATAGCCTCGACGGC GAAGCTGCGGGGGCAGGAAG
Downstream 100 bases:
>100_bases AACAATGACGACCCCCTCCAAGTCCTGGATCGCCGATCTTCCGAAGGATCGCCTGATTGCTGAATTCTCCGTCTGGTCGG CCGATCTCGTACGTCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Esterase Protein; 3-Oxoadipate Enol-Lactonase; Alpha/Beta Family Hydrolase
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPLEAGFRRVTIEARGHGHSQAGNPEQLSIATFCDDIA AYIEKSLTPPMVIGGISMGAAIALRLAVKRPDLVKALIIARPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPV GVRLAAEAPDNLASLAGFFSRTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDSIHPLSHARALAERIAGAR FVQITPKTKSRPQYVADFRLAMGNFLKEL
Sequences:
>Translated_269_residues MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPLEAGFRRVTIEARGHGHSQAGNPEQLSIATFCDDIA AYIEKSLTPPMVIGGISMGAAIALRLAVKRPDLVKALIIARPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPV GVRLAAEAPDNLASLAGFFSRTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDSIHPLSHARALAERIAGAR FVQITPKTKSRPQYVADFRLAMGNFLKEL >Mature_269_residues MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPLEAGFRRVTIEARGHGHSQAGNPEQLSIATFCDDIA AYIEKSLTPPMVIGGISMGAAIALRLAVKRPDLVKALIIARPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPV GVRLAAEAPDNLASLAGFFSRTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDSIHPLSHARALAERIAGAR FVQITPKTKSRPQYVADFRLAMGNFLKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28613; Mature: 28613
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPLEAGFRRVTIEARGHG CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC HSQAGNPEQLSIATFCDDIAAYIEKSLTPPMVIGGISMGAAIALRLAVKRPDLVKALIIA CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHH RPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPVGVRLAAEAPDNLASLAGFFS CCCEEECCCCCCCCCCHHHHHHHHHCCCCCHHHEEEECCCCEEEECCCCHHHHHHHHHHH RTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDSIHPLSHARALAERIAGAR CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHCCCE FVQITPKTKSRPQYVADFRLAMGNFLKEL EEEECCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRRAEPFETSDGTILNVDMAGEGASIIFQHGLCGDAAQTDEAFPLEAGFRRVTIEARGHG CCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC HSQAGNPEQLSIATFCDDIAAYIEKSLTPPMVIGGISMGAAIALRLAVKRPDLVKALIIA CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHH RPAWLTASAPENMSPNAEVGHLLKTLPPDHAKAAFLAGPVGVRLAAEAPDNLASLAGFFS CCCEEECCCCCCCCCCHHHHHHHHHCCCCCHHHEEEECCCCEEEECCCCHHHHHHHHHHH RTPLDVTAELLTRISNDGPDVTDQDVGNLTVPTLVIGHDRDSIHPLSHARALAERIAGAR CCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECEEEEECCCCCCCHHHHHHHHHHHHCCCE FVQITPKTKSRPQYVADFRLAMGNFLKEL EEEECCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA