Click here to switch to the map view.

The map label for this gene is 116248707

Identifier: 116248707

GI number: 116248707

Start: 30344

End: 31189

Strand: Direct

Name: 116248707

Synonym: pRL120031

Alternate gene names: NA

Gene position: 30344-31189 (Clockwise)

Preceding gene: 116248706

Following gene: 116248708

Centisome position: 3.49

GC content: 64.07

Gene sequence:

>846_bases
ATGAAGCTCGGCATCTTCGCAAAGACCTTCGAGGGAACGGAACCCGCAACCGTTCTCAACTCGGTCGCAGGCGCCGGGTT
CAACTGCGCACAATACAATATGGCCTGCTCGGGCCTTGCGCCGATGCCGGAGATCATCACGGAAGCCCAGGCCCGCGCAG
TCGGCGAAGCGGCGCGTAGCAGCGGCGTCGAAATCGTTGCCGTTTCGGGCACCTTCAACATGATCCATCCGGATCCCGCC
GTGCGCGAGGCCGGCCTTCGCAGACTGGCAACGCTGGCCGAGCGCTGCGCCGGCATGTCGACGACCCTGATCACGCTCTG
CACCGGCACGCGCGACCCCATCGATCAGTGGAAGGCGCATGCCGACAACGACACGCCGGAGGCCTGGCGGGATCTCCTCG
AGGCCATGGGGGCGGCAATCGAGATCGCCGAGCGCTACGAGGTCGATCTCGGCATCGAGCCCGAGCTTGCCAATGTCGTC
AACTCGGCTGAGAAGGCTTCCCGGCTGATCGCGGCTCTGAAGAGCCCCCGCGTCAAGATCGTACTCGATCCGGCCAATCT
CTTCGAGATCGCGACGCTGGATGAGCAGCGGAGCATTGTCTCTTCCGGCATCGACCTTCTGGCCGATCGGATCGTCATGG
CGCATGCGAAAGATCGCAATCCGGACGGCAGTTTCGCGACCGCCGGCAAGGGCGTGCTCGACTACGCGCATTATCTCGGC
CGTCTCAAGGCGATCGGCTTTAAGGGCAGTCTCGTCACGCATGGTCTTTCGGCCTCGGAGGCGGCTGGTGTGGCGGCCTT
CCTGAAGAATAGCCTCGACGGCGAAGCTGCGGGGGCAGGAAGATGA

Upstream 100 bases:

>100_bases
TCGATGATGGTCTGGCATCCGTCCGGGCCATGGTCGCGGTTGCGCGCTCCGTCGAAAACGGCAAGACGGTTGCGCTGGCT
GACGTCACGGGTGGCGTGTG

Downstream 100 bases:

>100_bases
GACGGGCTGAACCGTTCGAAACCAGCGACGGGACCATTCTCAACGTCGATATGGCGGGCGAGGGCGCGTCCATAATCTTC
CAGCACGGCTTATGCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; AP Endonuclease; Epimerase Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEIITEAQARAVGEAARSSGVEIVAVSGTFNMIHPDPA
VREAGLRRLATLAERCAGMSTTLITLCTGTRDPIDQWKAHADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVV
NSAEKASRLIAALKSPRVKIVLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPDGSFATAGKGVLDYAHYLG
RLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR

Sequences:

>Translated_281_residues
MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEIITEAQARAVGEAARSSGVEIVAVSGTFNMIHPDPA
VREAGLRRLATLAERCAGMSTTLITLCTGTRDPIDQWKAHADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVV
NSAEKASRLIAALKSPRVKIVLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPDGSFATAGKGVLDYAHYLG
RLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR
>Mature_281_residues
MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEIITEAQARAVGEAARSSGVEIVAVSGTFNMIHPDPA
VREAGLRRLATLAERCAGMSTTLITLCTGTRDPIDQWKAHADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVV
NSAEKASRLIAALKSPRVKIVLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPDGSFATAGKGVLDYAHYLG
RLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29492; Mature: 29492

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEIITEAQARAVGEAARS
CCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH
SGVEIVAVSGTFNMIHPDPAVREAGLRRLATLAERCAGMSTTLITLCTGTRDPIDQWKAH
CCCEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHC
ADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVVNSAEKASRLIAALKSPRVKI
CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
VLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPDGSFATAGKGVLDYAHYLG
EECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
RLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR
HHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKLGIFAKTFEGTEPATVLNSVAGAGFNCAQYNMACSGLAPMPEIITEAQARAVGEAARS
CCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH
SGVEIVAVSGTFNMIHPDPAVREAGLRRLATLAERCAGMSTTLITLCTGTRDPIDQWKAH
CCCEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHC
ADNDTPEAWRDLLEAMGAAIEIAERYEVDLGIEPELANVVNSAEKASRLIAALKSPRVKI
CCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
VLDPANLFEIATLDEQRSIVSSGIDLLADRIVMAHAKDRNPDGSFATAGKGVLDYAHYLG
EECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
RLKAIGFKGSLVTHGLSASEAAGVAAFLKNSLDGEAAGAGR
HHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA