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The map label for this gene is ycjP [H]

Identifier: 116248694

GI number: 116248694

Start: 16872

End: 17717

Strand: Reverse

Name: ycjP [H]

Synonym: pRL120018

Alternate gene names: 116248694

Gene position: 17717-16872 (Counterclockwise)

Preceding gene: 116248695

Following gene: NA

Centisome position: 2.04

GC content: 56.74

Gene sequence:

>846_bases
ATGGCAAAGCGTTCCTTCAAAAGCTCGGTATTGCCGACCATCCTGACCTATCTCGGCCTGGCGATCGGCCTCGTCTTTTC
GGCCTTTCCGATCGTGTGGATGTTTTTCAGTTCGCTGAAGTCGAATACAGAAATCTTCGCCCTTCCGCCGCGGCTGTTGC
CGGATGATTTTACGGTGGCCGCCTATCTGACGATTTTCAACGATCCCGTGAAAGTGCGGTTCTTCATCAACAGTTACTTC
GTCGCCGGCGTCGTCACCGCCCTGACCCTGGTCGTCGCGATCGTAACCGCCTACGGCTTCAGCCGCTATCAGTTCCGGTT
CAAGAACACCTTGAACATCTTCATCATCAGCACGCAGACCGTTCCGCCAATCACCCTTCTCATCCCCTATTTCGGAATGG
TGGTCGCCTTCAGGATCTTCGATACCTATCTGGCGCTGATCCTCACCTACCTGGTTTTCACCCTGCCTTACGCCGTCCTG
CTGATGACAGGCTATCTCAACACCCTGCCGAAAGAGCTGGATGAGGCCGTCCTAGTCGACGGCGGCTCAAGCTGGACGGC
GCTCTGGCGTGTCATCGTTCCCGTTTCCATCCCCGGGATCGTCGCCACTGCGGTCTACACCTTCCTGCTGGCCTGGAACG
AATTCCTCTTTGCGCTGACTCTGACGAAATCGATGGACCTCAGAACCGTGCCGATCGGCATCCAGCTTCTGATGGGCCAG
CACGCTTTCGAATGGAACGAAATGATGGCGATGAGCGTGCTCGGTTCCCTCCCCCTTCTGGTCCTTTACCTGGTTGCTCA
ACGCTACTTCCTGGCGGGCATGACCGCCGGCTCGGTCAAAAGCTGA

Upstream 100 bases:

>100_bases
GTATGAATTCTCGCTGGCTTCGGCGAGCGCAATGATCATCCTCATCATCTCGATGAGCGTCACCTACTTCTACATCAAAC
ACCAGCAGCGCAGGTGATCC

Downstream 100 bases:

>100_bases
CGAGACGTCTCAGAACCCGCGCCAGCCGCGTCCAAGATCGTTTGGGCAATATCGGCAAAGCCAAGCCCGGCGGGCTGCGA
GGAGACCCATTTTGGCGCGT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEIFALPPRLLPDDFTVAAYLTIFNDPVKVRFFINSYF
VAGVVTALTLVVAIVTAYGFSRYQFRFKNTLNIFIISTQTVPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVL
LMTGYLNTLPKELDEAVLVDGGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLTKSMDLRTVPIGIQLLMGQ
HAFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS

Sequences:

>Translated_281_residues
MAKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEIFALPPRLLPDDFTVAAYLTIFNDPVKVRFFINSYF
VAGVVTALTLVVAIVTAYGFSRYQFRFKNTLNIFIISTQTVPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVL
LMTGYLNTLPKELDEAVLVDGGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLTKSMDLRTVPIGIQLLMGQ
HAFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS
>Mature_280_residues
AKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEIFALPPRLLPDDFTVAAYLTIFNDPVKVRFFINSYFV
AGVVTALTLVVAIVTAYGFSRYQFRFKNTLNIFIISTQTVPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVLL
MTGYLNTLPKELDEAVLVDGGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLTKSMDLRTVPIGIQLLMGQH
AFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=34.8314606741573, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=28.436018957346, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=26.2962962962963, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31350; Mature: 31219

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEIFALPPRLLPDDFTVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
AYLTIFNDPVKVRFFINSYFVAGVVTALTLVVAIVTAYGFSRYQFRFKNTLNIFIISTQT
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEEECCC
VPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVLLMTGYLNTLPKELDEAVLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLTKSMDLRTVPIGIQLLMGQ
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCC
HAFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKRSFKSSVLPTILTYLGLAIGLVFSAFPIVWMFFSSLKSNTEIFALPPRLLPDDFTVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
AYLTIFNDPVKVRFFINSYFVAGVVTALTLVVAIVTAYGFSRYQFRFKNTLNIFIISTQT
HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCEEEEEEECCC
VPPITLLIPYFGMVVAFRIFDTYLALILTYLVFTLPYAVLLMTGYLNTLPKELDEAVLVD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GGSSWTALWRVIVPVSIPGIVATAVYTFLLAWNEFLFALTLTKSMDLRTVPIGIQLLMGQ
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCC
HAFEWNEMMAMSVLGSLPLLVLYLVAQRYFLAGMTAGSVKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]