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The map label for this gene is yurN [H]

Identifier: 116248695

GI number: 116248695

Start: 17721

End: 18659

Strand: Reverse

Name: yurN [H]

Synonym: pRL120019

Alternate gene names: 116248695

Gene position: 18659-17721 (Counterclockwise)

Preceding gene: 116248696

Following gene: 116248694

Centisome position: 2.14

GC content: 55.91

Gene sequence:

>939_bases
ATGAATCATTCGGCTACGGCTCTGGTCGCTGCGCAAGCCAAAGCGCGAAGAAAAGGATGGCTTCGTTACAGCACCTTGAG
GAAGCTGGTGCCGTATTTCTACGTTTCGCCGGCGACCCTGCTGCTTGTCCTGCTGATGCTGTTTCCCATGGTGATGGTCT
TCAAATATTCACTGATGGACGGCGCCATCATGAAAAAGGACGCTGCCTTCGCGGGCGTCCAGAATTATATGACCATCTTC
GAGAATCCGGTCTTCTGGCAGTCGGTCGTGCAGACGCTTTATTTCACGATCATGAGCGTCATCTTCCACTTCATCATCGG
CCTGGCCTTCGCGCTGCTGTTGAACACCAACCGCGTCGATCCGCTCATTCGCAGCATCCTGCGCGTGCTCTTCATCCTGC
CCTGGCTGTTCACGGCCGTCATCATCGCCATCATCTGGCGCCTGCTGCTCGACCCGAACGGCGTCGTCAACAGCGTGCTG
ATGGCGCTCCATATCATCAACTTCAAGGTCGAGTGGTTCTCCTCGACGCGCACGGCCATCCACGCTTTGACCTTCGCAAA
CATCTGGGCAGGCTATCCGCTCTACATGGTCAGCCTGCTCGCCGGCCTCCAGGGCATTTCGAAGGAGCTTTACGAGGCGG
CCGGTATCGATGGCGCGAACGAAATCCAAAAGTTCTGGTACATCACCATTCCGCAGCTGATGCCGATCATCATCAGCATC
GCGCTCCTCGATTTCATCTGGACGATGCAGGTTTTTCCACTCGTATGGATGACGACGGGCGGCGGCCCGATCTATTCGAC
GGAAGTGCTCTCCACCTTCACCTACAAGCTCGCCTTCTCCCAGTATGAATTCTCGCTGGCTTCGGCGAGCGCAATGATCA
TCCTCATCATCTCGATGAGCGTCACCTACTTCTACATCAAACACCAGCAGCGCAGGTGA

Upstream 100 bases:

>100_bases
GCGAAGTTCTAAGCACGTCGCTTTCACGGATCACCGGCAGCGCAACCATGCGCTGCCGGTGCAAGTCGTCAAATTTCGGC
AGAATAGAAAGTCACAGCTC

Downstream 100 bases:

>100_bases
TCCATGGCAAAGCGTTCCTTCAAAAGCTCGGTATTGCCGACCATCCTGACCTATCTCGGCCTGGCGATCGGCCTCGTCTT
TTCGGCCTTTCCGATCGTGT

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNHSATALVAAQAKARRKGWLRYSTLRKLVPYFYVSPATLLLVLLMLFPMVMVFKYSLMDGAIMKKDAAFAGVQNYMTIF
ENPVFWQSVVQTLYFTIMSVIFHFIIGLAFALLLNTNRVDPLIRSILRVLFILPWLFTAVIIAIIWRLLLDPNGVVNSVL
MALHIINFKVEWFSSTRTAIHALTFANIWAGYPLYMVSLLAGLQGISKELYEAAGIDGANEIQKFWYITIPQLMPIIISI
ALLDFIWTMQVFPLVWMTTGGGPIYSTEVLSTFTYKLAFSQYEFSLASASAMIILIISMSVTYFYIKHQQRR

Sequences:

>Translated_312_residues
MNHSATALVAAQAKARRKGWLRYSTLRKLVPYFYVSPATLLLVLLMLFPMVMVFKYSLMDGAIMKKDAAFAGVQNYMTIF
ENPVFWQSVVQTLYFTIMSVIFHFIIGLAFALLLNTNRVDPLIRSILRVLFILPWLFTAVIIAIIWRLLLDPNGVVNSVL
MALHIINFKVEWFSSTRTAIHALTFANIWAGYPLYMVSLLAGLQGISKELYEAAGIDGANEIQKFWYITIPQLMPIIISI
ALLDFIWTMQVFPLVWMTTGGGPIYSTEVLSTFTYKLAFSQYEFSLASASAMIILIISMSVTYFYIKHQQRR
>Mature_312_residues
MNHSATALVAAQAKARRKGWLRYSTLRKLVPYFYVSPATLLLVLLMLFPMVMVFKYSLMDGAIMKKDAAFAGVQNYMTIF
ENPVFWQSVVQTLYFTIMSVIFHFIIGLAFALLLNTNRVDPLIRSILRVLFILPWLFTAVIIAIIWRLLLDPNGVVNSVL
MALHIINFKVEWFSSTRTAIHALTFANIWAGYPLYMVSLLAGLQGISKELYEAAGIDGANEIQKFWYITIPQLMPIIISI
ALLDFIWTMQVFPLVWMTTGGGPIYSTEVLSTFTYKLAFSQYEFSLASASAMIILIISMSVTYFYIKHQQRR

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=237, Percent_Identity=30.379746835443, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1790465, Length=220, Percent_Identity=30.9090909090909, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=24.5733788395904, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787080, Length=240, Percent_Identity=25.8333333333333, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35565; Mature: 35565

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHEECCCCC
>Mature Secondary Structure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HHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]