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The map label for this gene is 114800531

Identifier: 114800531

GI number: 114800531

Start: 1009084

End: 1009821

Strand: Direct

Name: 114800531

Synonym: HNE_0996

Alternate gene names: NA

Gene position: 1009084-1009821 (Clockwise)

Preceding gene: 114800002

Following gene: 114797361

Centisome position: 27.24

GC content: 58.67

Gene sequence:

>738_bases
ATGAGCGCGCTGTTTGAAGAACTTGATTACAGCCCGACAGAGATCGGCATCCTGTCGCTGCGCCGGCGCTGGGAACCGCG
GCTGAGCAAAGATGTCTACGAAATCAAGCTCGGGGATGAGCATCTGATGTCGGATGTTTTTACGGTTTCGGAAATTGCGC
TGGCGGATCTGGGGCTCAACGCTTTGGCCGGGAGTGACTTGCGTGTGGTCGTGGGCGGTCTCGGCATGGGGTATACGGCG
CTGGCAGCGTTGAAGGATGCGCGCGTTGCGGAAATATCGGTGGTGGAGTTGCTGGAGCCGGTGATCGACTGGCACAGGCG
GGGCATTCTGCCGATCGGGGACGTGCTGCATACCGATCGCCGGGTGCGGCTTGTGCACGGTGATTTTTTTGAGCTGGCGT
GCGCGCCAACCGGATTTGATCCTGATAATCCTCACATGACCTATGATGCGATCTTGCTGGATATTGATCATTCGCCGGAG
ATGCTGCTCGACAGCCGCAGCACCGGATTTTACCGTCCCGAAGGGCTGAAGGCGATGGCGGGGCATCTGCGGCCGGGTGG
CGTCTTTGGGCTATGGTCCAATGTGGCGCCGAGTGATGCGTTTACGGACATACTGAAGGAGGTGTTCCCAGAGGCGTGGG
CGCAGCCGGTCGTATTTCGGAATCCCTATGACCATTCGGAAATTGTGCAGACCGTGTATCTCGCCCGGACAGCGCCTGAA
GGCGAGTCTGTGATATGA

Upstream 100 bases:

>100_bases
GAAAGCCTGGGCGGAGGCCGGAGGGTGCCCTGAGACATTCTGCAATCCCATTGCGCCCGCGACGCTGCGCTGGCGCACCT
GAAACGAGCAAGGAAACCAC

Downstream 100 bases:

>100_bases
GCCAAGCTGCGTCTGGCCGGGCAGGTCAGACCGGATATATTCCGTACAAGGATATCATCCTGCGGCACAAGGCGCCGCTT
ACCTGAACAGCAGGAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSALFEELDYSPTEIGILSLRRRWEPRLSKDVYEIKLGDEHLMSDVFTVSEIALADLGLNALAGSDLRVVVGGLGMGYTA
LAALKDARVAEISVVELLEPVIDWHRRGILPIGDVLHTDRRVRLVHGDFFELACAPTGFDPDNPHMTYDAILLDIDHSPE
MLLDSRSTGFYRPEGLKAMAGHLRPGGVFGLWSNVAPSDAFTDILKEVFPEAWAQPVVFRNPYDHSEIVQTVYLARTAPE
GESVI

Sequences:

>Translated_245_residues
MSALFEELDYSPTEIGILSLRRRWEPRLSKDVYEIKLGDEHLMSDVFTVSEIALADLGLNALAGSDLRVVVGGLGMGYTA
LAALKDARVAEISVVELLEPVIDWHRRGILPIGDVLHTDRRVRLVHGDFFELACAPTGFDPDNPHMTYDAILLDIDHSPE
MLLDSRSTGFYRPEGLKAMAGHLRPGGVFGLWSNVAPSDAFTDILKEVFPEAWAQPVVFRNPYDHSEIVQTVYLARTAPE
GESVI
>Mature_244_residues
SALFEELDYSPTEIGILSLRRRWEPRLSKDVYEIKLGDEHLMSDVFTVSEIALADLGLNALAGSDLRVVVGGLGMGYTAL
AALKDARVAEISVVELLEPVIDWHRRGILPIGDVLHTDRRVRLVHGDFFELACAPTGFDPDNPHMTYDAILLDIDHSPEM
LLDSRSTGFYRPEGLKAMAGHLRPGGVFGLWSNVAPSDAFTDILKEVFPEAWAQPVVFRNPYDHSEIVQTVYLARTAPEG
ESVI

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27141; Mature: 27010

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALFEELDYSPTEIGILSLRRRWEPRLSKDVYEIKLGDEHLMSDVFTVSEIALADLGLN
CCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCH
ALAGSDLRVVVGGLGMGYTALAALKDARVAEISVVELLEPVIDWHRRGILPIGDVLHTDR
HHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
RVRLVHGDFFELACAPTGFDPDNPHMTYDAILLDIDHSPEMLLDSRSTGFYRPEGLKAMA
EEEEEECCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHH
GHLRPGGVFGLWSNVAPSDAFTDILKEVFPEAWAQPVVFRNPYDHSEIVQTVYLARTAPE
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCC
GESVI
CCCCC
>Mature Secondary Structure 
SALFEELDYSPTEIGILSLRRRWEPRLSKDVYEIKLGDEHLMSDVFTVSEIALADLGLN
CHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCH
ALAGSDLRVVVGGLGMGYTALAALKDARVAEISVVELLEPVIDWHRRGILPIGDVLHTDR
HHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
RVRLVHGDFFELACAPTGFDPDNPHMTYDAILLDIDHSPEMLLDSRSTGFYRPEGLKAMA
EEEEEECCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCHHHHH
GHLRPGGVFGLWSNVAPSDAFTDILKEVFPEAWAQPVVFRNPYDHSEIVQTVYLARTAPE
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCC
GESVI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA