Click here to switch to the map view.

The map label for this gene is crcB

Identifier: 114797361

GI number: 114797361

Start: 1013179

End: 1013562

Strand: Direct

Name: crcB

Synonym: HNE_1001

Alternate gene names: 114797361

Gene position: 1013179-1013562 (Clockwise)

Preceding gene: 114800531

Following gene: 114797120

Centisome position: 27.35

GC content: 64.84

Gene sequence:

>384_bases
ATGAACGGATTTCTTCTCGTTGCTCTGGGCGGCGCCATTGGCGCGAGCCTGCGCCATGGCGTGGGGCTGGTGGCTGTGCG
CCATCTGCCGCTCGGCTGGCCGTGGGGGACGAGTTTTGTGAATATCGCGGGCAGCCTGGCGATGGGCCTGCTGGCCGGAT
GGCTGGCGCTGAAGGCGGAAGGGGCGAGCCAGGAGGCGCGGCTTTTCCTCGCCACCGGCGTGCTGGGCGGGTTCACGACG
TTTTCGGCATTTTCACTTGAGGTCGCCACTATGCTGCGCTCGGGCGAGACCTTGAAGGCCGGGCTTTATGCCGGGGTTTC
GGTTCTGCTTGGCGTTTCGGCCCTCTTTATCGGCCTCTGGATGGCCCGCAGGATATTCGCATGA

Upstream 100 bases:

>100_bases
GGGTGTATTTGACGGCTAACGCGGTGGCGCGCAAGGGGGCGTTCTGCCGTTATGGCAACTAGGCTGGCGTATTTTGCTGC
CTCCGCGTAAAAGGCCGCGC

Downstream 100 bases:

>100_bases
GCGGACAGATTATTACCGAAACCGTGTCGGACAAGGAAACCGGCGCGCGCCTTGACCGTTGGATCAAGCGGCGCATGAAC
GCGACGCAGGGTCAGGTGGA

Product: crcB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNGFLLVALGGAIGASLRHGVGLVAVRHLPLGWPWGTSFVNIAGSLAMGLLAGWLALKAEGASQEARLFLATGVLGGFTT
FSAFSLEVATMLRSGETLKAGLYAGVSVLLGVSALFIGLWMARRIFA

Sequences:

>Translated_127_residues
MNGFLLVALGGAIGASLRHGVGLVAVRHLPLGWPWGTSFVNIAGSLAMGLLAGWLALKAEGASQEARLFLATGVLGGFTT
FSAFSLEVATMLRSGETLKAGLYAGVSVLLGVSALFIGLWMARRIFA
>Mature_127_residues
MNGFLLVALGGAIGASLRHGVGLVAVRHLPLGWPWGTSFVNIAGSLAMGLLAGWLALKAEGASQEARLFLATGVLGGFTT
FSAFSLEVATMLRSGETLKAGLYAGVSVLLGVSALFIGLWMARRIFA

Specific function: Unknown

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CRCB_HYPNA (Q0C3G9)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_759724.1
- STRING:   Q0C3G9
- GeneID:   4287215
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_1001
- NMPDR:   fig|228405.5.peg.975
- TIGR:   HNE_1001
- eggNOG:   COG0239
- HOGENOM:   HBG753179
- OMA:   LASMFFW
- BioCyc:   HNEP81032:HNE_1001-MONOMER
- HAMAP:   MF_00454
- InterPro:   IPR003691
- TIGRFAMs:   TIGR00494

Pfam domain/function: PF02537 CRCB

EC number: NA

Molecular weight: Translated: 13092; Mature: 13092

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10e197b4)-; HASH(0x12393874)-; HASH(0x1267ebc0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFLLVALGGAIGASLRHGVGLVAVRHLPLGWPWGTSFVNIAGSLAMGLLAGWLALKAE
CCCEEEEEECCHHHHHHHCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GASQEARLFLATGVLGGFTTFSAFSLEVATMLRSGETLKAGLYAGVSVLLGVSALFIGLW
CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MARRIFA
HHHHHCH
>Mature Secondary Structure
MNGFLLVALGGAIGASLRHGVGLVAVRHLPLGWPWGTSFVNIAGSLAMGLLAGWLALKAE
CCCEEEEEECCHHHHHHHCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GASQEARLFLATGVLGGFTTFSAFSLEVATMLRSGETLKAGLYAGVSVLLGVSALFIGLW
CCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MARRIFA
HHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA