| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is alx [H]
Identifier: 114800512
GI number: 114800512
Start: 570422
End: 571474
Strand: Reverse
Name: alx [H]
Synonym: HNE_0574
Alternate gene names: 114800512
Gene position: 571474-570422 (Counterclockwise)
Preceding gene: 114798890
Following gene: 114797591
Centisome position: 15.42
GC content: 58.31
Gene sequence:
>1053_bases ATGCCTGATTTCCTGACCGTCGAGTACGCGGCGCAGCCCTTGTGGCTGTGGTTCAGCTTCCTCAGCCTTATCTGCGTCCT GCTCTGGGTCGATCTCGGCCTCCTCAACAAGAAGGATGGGGTCGTCTCCGCCAAGAAAAGCGCCATCATGTGGGCGTGCT TTGCGTCCCTCGCCGTGGCGTTCGGCTTCTATATCTATTTCGGCTACCAGCCCGACCCGCAATTCTACAACGACCCCACA AACCTCAACCAGCAGGCCGCCGTCCAGTTCGCGACAGGCTATCTGCTGGAAACGGCGCTGGCCTTCGACAACATCTTCGT CATCGGCATGGTGTTCACCTTCTTCGCCGTGCCCCGCGAATATCAGCACAGGGTGCTGTTCTGGGGCATCCTGGGCGCCA TCATTTTCCGCGGCATCTTCATTTCGCTGGGCGCTGCCATCGTCAACGAATTCACCTGGGTGCTGTTCATCTTCGCCGCT TTCCTGCTCTACACCGGCGGCAAGATGCTGTTCTCCGGCGGCGATGAGGACGAACCCGAGCTTAACCTTCACAACAACCC GGTCTTCAAATTCCTGAAGAAGCGCCTGCGCGTCACCGACGAGATCACCAACCACAATTTCGTCGTGCGCAAGCCAGACC CGCTGACCGGCAAGATGACCCGCTATGCCACGCCGCTTCTGCTGGCACTGCTGATGGTGGAAACGGTCGACATCATCTTC GCGGTCGACTCGGTGCCCGCAATCTTCGCCGTCACGCGCGACCCGTTCATCGTCTACACCTCGAACATCTTCGCCATTCT TGGCCTGCGCTCGATGTATTTCATGCTGTCAGCAGCGGTGGAGCGGTTCAAATACCTCAAATATGGCCTGGCCGCCGTGC TGGTATTGATCGGCATCAAGATCTTCTGGAACTTCCTGCTCTACAAGGAACTCCACATCGTGCCGTACCTTGAGGCGCAC TGGTCGCTGATGCTGACCATCGCGCTGCTGGGTGGATCAATCCTGTTCTCCCTCTGGAAAACCAGCGGGAAAGGCCCTGC GCACGAAGTCTGA
Upstream 100 bases:
>100_bases TGGTTCCGGGCCCCTCTGGCGTTTGCGGCGGCAAGCGCGATGTCGGACACCCCATGAAATTGCGCGGACGCGGCGCGCCT CCCTAGGTGGCACTCCCCCA
Downstream 100 bases:
>100_bases AGATTGCCCGAGGCGCAAACCCTTTGTCAGGTGCTCGCTTGCGTCCTGACGAAGGGTTTCCCCTCTTCCCGGCGCGGGAT CACCTTGAAAATACCGGTGC
Product: TerC family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPDFLTVEYAAQPLWLWFSFLSLICVLLWVDLGLLNKKDGVVSAKKSAIMWACFASLAVAFGFYIYFGYQPDPQFYNDPT NLNQQAAVQFATGYLLETALAFDNIFVIGMVFTFFAVPREYQHRVLFWGILGAIIFRGIFISLGAAIVNEFTWVLFIFAA FLLYTGGKMLFSGGDEDEPELNLHNNPVFKFLKKRLRVTDEITNHNFVVRKPDPLTGKMTRYATPLLLALLMVETVDIIF AVDSVPAIFAVTRDPFIVYTSNIFAILGLRSMYFMLSAAVERFKYLKYGLAAVLVLIGIKIFWNFLLYKELHIVPYLEAH WSLMLTIALLGGSILFSLWKTSGKGPAHEV
Sequences:
>Translated_350_residues MPDFLTVEYAAQPLWLWFSFLSLICVLLWVDLGLLNKKDGVVSAKKSAIMWACFASLAVAFGFYIYFGYQPDPQFYNDPT NLNQQAAVQFATGYLLETALAFDNIFVIGMVFTFFAVPREYQHRVLFWGILGAIIFRGIFISLGAAIVNEFTWVLFIFAA FLLYTGGKMLFSGGDEDEPELNLHNNPVFKFLKKRLRVTDEITNHNFVVRKPDPLTGKMTRYATPLLLALLMVETVDIIF AVDSVPAIFAVTRDPFIVYTSNIFAILGLRSMYFMLSAAVERFKYLKYGLAAVLVLIGIKIFWNFLLYKELHIVPYLEAH WSLMLTIALLGGSILFSLWKTSGKGPAHEV >Mature_349_residues PDFLTVEYAAQPLWLWFSFLSLICVLLWVDLGLLNKKDGVVSAKKSAIMWACFASLAVAFGFYIYFGYQPDPQFYNDPTN LNQQAAVQFATGYLLETALAFDNIFVIGMVFTFFAVPREYQHRVLFWGILGAIIFRGIFISLGAAIVNEFTWVLFIFAAF LLYTGGKMLFSGGDEDEPELNLHNNPVFKFLKKRLRVTDEITNHNFVVRKPDPLTGKMTRYATPLLLALLMVETVDIIFA VDSVPAIFAVTRDPFIVYTSNIFAILGLRSMYFMLSAAVERFKYLKYGLAAVLVLIGIKIFWNFLLYKELHIVPYLEAHW SLMLTIALLGGSILFSLWKTSGKGPAHEV
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=289, Percent_Identity=46.0207612456747, Blast_Score=234, Evalue=4e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 39684; Mature: 39553
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFLTVEYAAQPLWLWFSFLSLICVLLWVDLGLLNKKDGVVSAKKSAIMWACFASLAVA CCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGFYIYFGYQPDPQFYNDPTNLNQQAAVQFATGYLLETALAFDNIFVIGMVFTFFAVPRE HHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YQHRVLFWGILGAIIFRGIFISLGAAIVNEFTWVLFIFAAFLLYTGGKMLFSGGDEDEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC LNLHNNPVFKFLKKRLRVTDEITNHNFVVRKPDPLTGKMTRYATPLLLALLMVETVDIIF CCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AVDSVPAIFAVTRDPFIVYTSNIFAILGLRSMYFMLSAAVERFKYLKYGLAAVLVLIGIK HHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFWNFLLYKELHIVPYLEAHWSLMLTIALLGGSILFSLWKTSGKGPAHEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PDFLTVEYAAQPLWLWFSFLSLICVLLWVDLGLLNKKDGVVSAKKSAIMWACFASLAVA CCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGFYIYFGYQPDPQFYNDPTNLNQQAAVQFATGYLLETALAFDNIFVIGMVFTFFAVPRE HHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YQHRVLFWGILGAIIFRGIFISLGAAIVNEFTWVLFIFAAFLLYTGGKMLFSGGDEDEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC LNLHNNPVFKFLKKRLRVTDEITNHNFVVRKPDPLTGKMTRYATPLLLALLMVETVDIIF CCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AVDSVPAIFAVTRDPFIVYTSNIFAILGLRSMYFMLSAAVERFKYLKYGLAAVLVLIGIK HHCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFWNFLLYKELHIVPYLEAHWSLMLTIALLGGSILFSLWKTSGKGPAHEV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]