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The map label for this gene is srpC [H]

Identifier: 114798890

GI number: 114798890

Start: 571624

End: 573051

Strand: Reverse

Name: srpC [H]

Synonym: HNE_0575

Alternate gene names: 114798890

Gene position: 573051-571624 (Counterclockwise)

Preceding gene: 114800093

Following gene: 114800512

Centisome position: 15.47

GC content: 67.51

Gene sequence:

>1428_bases
ATGGTGGTGGAGATGCAGCGCGGTGTTCATTGCAGGCGCCGATACGCAGGCAGGGCGGCAAAGTCAACCGCGACCGGGCT
ATCCTGCCCCTTGCAACGGGCTGGACTTATCGGCCAAGAGGCAGAGGTGAGCGATATGTCCACCCCCGCGCCCAGCCTGA
AACACCTTGCCTCGGCCAGTTTCCGCGTCGGTTGCCTCGGCTTTGGCGGCCCCGCCGGGCAGATCGCCCTGATGCACCGC
ATCTTCGTGGAGGAGAAACGCTGGATCAGCGAGGCAGAATATCTCCACGCCCTTAACTATTGCATGCTCCTTCCCGGCCC
GGAGGCCCAGCAGCTGGCAACCTATGCCGGCTGGCGCCTCAACGGGCTGGCAGGCGGGGTGGTTGCCGGGCTGCTGTTCG
TCCTGCCCGGCGCGCTGATCGTGTTCGGCCTCACCTGGCTTTATGCCGCCTGGGGCACGCTGCCGGGGGTCGCCGCGCTA
TTCTATGGCGTGAAAGCCGCCGTGATCGGTTTCATTCTGGAAGCTCTGGTGAAGGTCGGCCGCCGGGCGCTCAAAGGCCC
GCAGGATGTGGCGCTGGCAGCGCTGGCCTTTCTGGCGCTGTTCCTGTTCCAGCTACCCTTTCCTCTGGTGATCGGCTTTG
CCGCCGCCATTGGCCTCGCGCGCAGCCTGTCGAAGCCGCCCCCGCCGCCGCTGCCAGATACCCTCCGCGAAAAAATGCCC
AGCGCCCGTAAGGCGTTCACCGCCGCCCTCGGCTGGGGCGCGGTCTGGATGGCGCCGCTGGTCAGCGCCTTCCTGCTGCT
CGGCCCCGATCATGTGCTCACCCGCGTGGGCGCCTTCTTCTCAAAGCTCGCCGTGCTGACTTTCGGCGGGGCTTACACGG
TGCTCGCCTATCTCCAGCAGGAGGCCGTGGAGGCCGAAGGCTGGCTCACCGCGCCGCAGATGATCGACGGGCTCGGCCTG
GCAGAAACCACGCCGGGGCCGCTGGTGCTGGTCAACCAGTTCGTGGGCTTCATGGCGGGGTGGCAGAGCGACGGCGGCGG
GCTCGCGCTGGCCGCAGCCGCCGCGCTCATGGCCAGCTGGTGCACCTTTGCGCCCTCTTTCGTGTGGATCTTTGCCGGGG
CGCCCTTCTCCGAAGCGCTCCGCCGCAGCCGGCTTGCCGCCGGCATCCTTTCGGCGGTGACCGCCGCAGTGTTCGGCATC
ATTGCCAAGGTGGCGGTGGTGTTTGGCTTTGCCGTGCTCTTTCACGCCGCCTTCGAGACGCAGCTGCCCTGGGGCGCAGC
GCTGACCCTGCCGGACTTTGCCGCGCCAGACCTGCTGGCCATCGCCATCGCAGCGGTCGCCGCCATCGCCCTTATCCGCC
TCAAGGCGAACATCGTCCTTGTCGTGATCGCCTGCGCACTGGCCGGTCTCCTCAGCCTCATCTGGTGA

Upstream 100 bases:

>100_bases
ACCTTGAGCGGCCTGCCTCATCTGGATCGGTTCTGGTGAAGGAACACTTGTCAGAGGGCGCAGCCGGACCGGTTCGCGCC
TCTTCGGCGCGTCATGCGTG

Downstream 100 bases:

>100_bases
CGGCCGCTTGACGGGGCAAACGGCTCCTCTATTTTGCCGCCAGTTCAGATGGTTCCGGGCCCCTCTGGCGTTTGCGGCGG
CAAGCGCGATGTCGGACACC

Product: putative chromate ion transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MVVEMQRGVHCRRRYAGRAAKSTATGLSCPLQRAGLIGQEAEVSDMSTPAPSLKHLASASFRVGCLGFGGPAGQIALMHR
IFVEEKRWISEAEYLHALNYCMLLPGPEAQQLATYAGWRLNGLAGGVVAGLLFVLPGALIVFGLTWLYAAWGTLPGVAAL
FYGVKAAVIGFILEALVKVGRRALKGPQDVALAALAFLALFLFQLPFPLVIGFAAAIGLARSLSKPPPPPLPDTLREKMP
SARKAFTAALGWGAVWMAPLVSAFLLLGPDHVLTRVGAFFSKLAVLTFGGAYTVLAYLQQEAVEAEGWLTAPQMIDGLGL
AETTPGPLVLVNQFVGFMAGWQSDGGGLALAAAAALMASWCTFAPSFVWIFAGAPFSEALRRSRLAAGILSAVTAAVFGI
IAKVAVVFGFAVLFHAAFETQLPWGAALTLPDFAAPDLLAIAIAAVAAIALIRLKANIVLVVIACALAGLLSLIW

Sequences:

>Translated_475_residues
MVVEMQRGVHCRRRYAGRAAKSTATGLSCPLQRAGLIGQEAEVSDMSTPAPSLKHLASASFRVGCLGFGGPAGQIALMHR
IFVEEKRWISEAEYLHALNYCMLLPGPEAQQLATYAGWRLNGLAGGVVAGLLFVLPGALIVFGLTWLYAAWGTLPGVAAL
FYGVKAAVIGFILEALVKVGRRALKGPQDVALAALAFLALFLFQLPFPLVIGFAAAIGLARSLSKPPPPPLPDTLREKMP
SARKAFTAALGWGAVWMAPLVSAFLLLGPDHVLTRVGAFFSKLAVLTFGGAYTVLAYLQQEAVEAEGWLTAPQMIDGLGL
AETTPGPLVLVNQFVGFMAGWQSDGGGLALAAAAALMASWCTFAPSFVWIFAGAPFSEALRRSRLAAGILSAVTAAVFGI
IAKVAVVFGFAVLFHAAFETQLPWGAALTLPDFAAPDLLAIAIAAVAAIALIRLKANIVLVVIACALAGLLSLIW
>Mature_475_residues
MVVEMQRGVHCRRRYAGRAAKSTATGLSCPLQRAGLIGQEAEVSDMSTPAPSLKHLASASFRVGCLGFGGPAGQIALMHR
IFVEEKRWISEAEYLHALNYCMLLPGPEAQQLATYAGWRLNGLAGGVVAGLLFVLPGALIVFGLTWLYAAWGTLPGVAAL
FYGVKAAVIGFILEALVKVGRRALKGPQDVALAALAFLALFLFQLPFPLVIGFAAAIGLARSLSKPPPPPLPDTLREKMP
SARKAFTAALGWGAVWMAPLVSAFLLLGPDHVLTRVGAFFSKLAVLTFGGAYTVLAYLQQEAVEAEGWLTAPQMIDGLGL
AETTPGPLVLVNQFVGFMAGWQSDGGGLALAAAAALMASWCTFAPSFVWIFAGAPFSEALRRSRLAAGILSAVTAAVFGI
IAKVAVVFGFAVLFHAAFETQLPWGAALTLPDFAAPDLLAIAIAAVAAIALIRLKANIVLVVIACALAGLLSLIW

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 49760; Mature: 49760

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEMQRGVHCRRRYAGRAAKSTATGLSCPLQRAGLIGQEAEVSDMSTPAPSLKHLASAS
CEEECCCCHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
FRVGCLGFGGPAGQIALMHRIFVEEKRWISEAEYLHALNYCMLLPGPEAQQLATYAGWRL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCC
NGLAGGVVAGLLFVLPGALIVFGLTWLYAAWGTLPGVAALFYGVKAAVIGFILEALVKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRALKGPQDVALAALAFLALFLFQLPFPLVIGFAAAIGLARSLSKPPPPPLPDTLREKMP
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
SARKAFTAALGWGAVWMAPLVSAFLLLGPDHVLTRVGAFFSKLAVLTFGGAYTVLAYLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EAVEAEGWLTAPQMIDGLGLAETTPGPLVLVNQFVGFMAGWQSDGGGLALAAAAALMASW
HHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
CTFAPSFVWIFAGAPFSEALRRSRLAAGILSAVTAAVFGIIAKVAVVFGFAVLFHAAFET
HHHCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QLPWGAALTLPDFAAPDLLAIAIAAVAAIALIRLKANIVLVVIACALAGLLSLIW
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVVEMQRGVHCRRRYAGRAAKSTATGLSCPLQRAGLIGQEAEVSDMSTPAPSLKHLASAS
CEEECCCCHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
FRVGCLGFGGPAGQIALMHRIFVEEKRWISEAEYLHALNYCMLLPGPEAQQLATYAGWRL
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCC
NGLAGGVVAGLLFVLPGALIVFGLTWLYAAWGTLPGVAALFYGVKAAVIGFILEALVKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRALKGPQDVALAALAFLALFLFQLPFPLVIGFAAAIGLARSLSKPPPPPLPDTLREKMP
HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
SARKAFTAALGWGAVWMAPLVSAFLLLGPDHVLTRVGAFFSKLAVLTFGGAYTVLAYLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EAVEAEGWLTAPQMIDGLGLAETTPGPLVLVNQFVGFMAGWQSDGGGLALAAAAALMASW
HHHHHCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
CTFAPSFVWIFAGAPFSEALRRSRLAAGILSAVTAAVFGIIAKVAVVFGFAVLFHAAFET
HHHCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QLPWGAALTLPDFAAPDLLAIAIAAVAAIALIRLKANIVLVVIACALAGLLSLIW
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]