| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yhhW [C]
Identifier: 114800459
GI number: 114800459
Start: 1521965
End: 1522825
Strand: Direct
Name: yhhW [C]
Synonym: HNE_1491
Alternate gene names: 114800459
Gene position: 1521965-1522825 (Clockwise)
Preceding gene: 114797952
Following gene: 114797657
Centisome position: 41.08
GC content: 63.07
Gene sequence:
>861_bases ATGTTTGAAAGATCAATAGCCCGCGTCACCCGGATCCCGGCCCTCGGGCCTGGCTTTGCCGGCGATAACCATAAGGCTGC GCTGGTGGTGGAGCCCGATAACCTTCCCGCGACGGACCCCTTCTTCCTCATGGCGGATGACAACATCACCCTGGCAGGGG CGCTGGGAGATGCACACCCCCATGCCGGGCTGGAGACCGTGACCTTCATGCTCAACGGCACACTGGAGGATATCAACGGC CGTCTGGACGAGGGCGATGTCGAGTGGATGACCGCCGGCAGCGGTATTGTTCATGGGGAAGACACGAAGGCTTCAACCGG GATGCGCCTGTTCCAGCTCTGGCTGGTCCTTCCGGAGGCGCAGCGCAACATGCCGCCGCGTGTGCAGGTCCTTCGCCGCG CTGAGATGCCGGTACACGCTGAGCCTGGCGTTATTGCAAAGGTTTACAGCGGGCGGCTGGAGAGCGTAGCGGCGCCGACA CTGAACGAAGTTCCGGTCACGCTGGCTGACATCCGGTTGACGCCGGGCGCCGTCTTCACGCCGCAGCTGCCAGCTGCCTA CAATGCGTTCCTTGTTGTTATTGACGGAGATATTGAAGCGGGCCGCTCTGCCGAGAAGCTGGCAGCCAACATGACCGCGT GGTCGGCCCCCTCCGCTGATGACGCAAGCCTGCTGGCGTTGCGGGCAGGACAGAACGGAGCCCGCGTGCTGCTCTATGCC GGTCAGCCGCAGAACATGCAGGTGGTTGCCGGAGGCCCGTTTATCGCCGGGTCGCGGGAGGAACTTGCGGGCTATTATGC TGCCTATCGACAGGGGAAGTTCCCACATGCCGGCACATTGCGCCCTGTCACTCACGCATAA
Upstream 100 bases:
>100_bases ATCGCCGTGCGTTGGTCGACGCTGCCGCGCCTCATCTGTTGAGGGCGATAGCAGGCGCGGGGGTGAACGTCTGGCTCAAA CTTCATGGAGAATCTGAATC
Downstream 100 bases:
>100_bases GACGCCTGTCGGCCACCTTCGAAACAAGTTGCCGGCCGAGGAGGATAAGTGTCGACCGGCGTTCTGCCGGTCGACACTTC ATAAGATGCACAGGGCGCGA
Product: pirin family protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MFERSIARVTRIPALGPGFAGDNHKAALVVEPDNLPATDPFFLMADDNITLAGALGDAHPHAGLETVTFMLNGTLEDING RLDEGDVEWMTAGSGIVHGEDTKASTGMRLFQLWLVLPEAQRNMPPRVQVLRRAEMPVHAEPGVIAKVYSGRLESVAAPT LNEVPVTLADIRLTPGAVFTPQLPAAYNAFLVVIDGDIEAGRSAEKLAANMTAWSAPSADDASLLALRAGQNGARVLLYA GQPQNMQVVAGGPFIAGSREELAGYYAAYRQGKFPHAGTLRPVTHA
Sequences:
>Translated_286_residues MFERSIARVTRIPALGPGFAGDNHKAALVVEPDNLPATDPFFLMADDNITLAGALGDAHPHAGLETVTFMLNGTLEDING RLDEGDVEWMTAGSGIVHGEDTKASTGMRLFQLWLVLPEAQRNMPPRVQVLRRAEMPVHAEPGVIAKVYSGRLESVAAPT LNEVPVTLADIRLTPGAVFTPQLPAAYNAFLVVIDGDIEAGRSAEKLAANMTAWSAPSADDASLLALRAGQNGARVLLYA GQPQNMQVVAGGPFIAGSREELAGYYAAYRQGKFPHAGTLRPVTHA >Mature_286_residues MFERSIARVTRIPALGPGFAGDNHKAALVVEPDNLPATDPFFLMADDNITLAGALGDAHPHAGLETVTFMLNGTLEDING RLDEGDVEWMTAGSGIVHGEDTKASTGMRLFQLWLVLPEAQRNMPPRVQVLRRAEMPVHAEPGVIAKVYSGRLESVAAPT LNEVPVTLADIRLTPGAVFTPQLPAAYNAFLVVIDGDIEAGRSAEKLAANMTAWSAPSADDASLLALRAGQNGARVLLYA GQPQNMQVVAGGPFIAGSREELAGYYAAYRQGKFPHAGTLRPVTHA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=29.1828793774319, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=29.1828793774319, Blast_Score=115, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 30384; Mature: 30384
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERSIARVTRIPALGPGFAGDNHKAALVVEPDNLPATDPFFLMADDNITLAGALGDAHP CCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCCC HAGLETVTFMLNGTLEDINGRLDEGDVEWMTAGSGIVHGEDTKASTGMRLFQLWLVLPEA CCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCCEEECCCCCCHHHHHEEHHHHCCCHH QRNMPPRVQVLRRAEMPVHAEPGVIAKVYSGRLESVAAPTLNEVPVTLADIRLTPGAVFT HCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCEEEEEEEECCCEEEC PQLPAAYNAFLVVIDGDIEAGRSAEKLAANMTAWSAPSADDASLLALRAGQNGARVLLYA CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEC GQPQNMQVVAGGPFIAGSREELAGYYAAYRQGKFPHAGTLRPVTHA CCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFERSIARVTRIPALGPGFAGDNHKAALVVEPDNLPATDPFFLMADDNITLAGALGDAHP CCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEECCCCCC HAGLETVTFMLNGTLEDINGRLDEGDVEWMTAGSGIVHGEDTKASTGMRLFQLWLVLPEA CCCCEEEEEEECCCHHHHCCCCCCCCEEEEECCCCEEECCCCCCHHHHHEEHHHHCCCHH QRNMPPRVQVLRRAEMPVHAEPGVIAKVYSGRLESVAAPTLNEVPVTLADIRLTPGAVFT HCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCEEEEEEEECCCEEEC PQLPAAYNAFLVVIDGDIEAGRSAEKLAANMTAWSAPSADDASLLALRAGQNGARVLLYA CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEC GQPQNMQVVAGGPFIAGSREELAGYYAAYRQGKFPHAGTLRPVTHA CCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]