| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800452
Identifier: 114800452
GI number: 114800452
Start: 1613688
End: 1614896
Strand: Reverse
Name: 114800452
Synonym: HNE_1581
Alternate gene names: NA
Gene position: 1614896-1613688 (Counterclockwise)
Preceding gene: 114797150
Following gene: 114799011
Centisome position: 43.59
GC content: 56.74
Gene sequence:
>1209_bases ATGACGCTCATTCTCCATAGACCGCTTGGTCACGACCTTCTTGTTGCCGTTCCTGAACACCTTAGAGTTATTTGCCCTAT GTCACAAAATCCCGTCTCGGTTCGCCTACTCGGAGAATTGCCTGCCAGGCTCTGGGGGCTGGATCTCGCGGAGTGGCAAC GCCGCGCCTGGAGTAAAGCAGGCGCCGGTCAGATTGATCAGGCTGCTGGCCGGCTGCTGGTTGGCATTGAGTGGGTGCTC TCCCCGTCCCTGCAGCGCAATTTGCTTGCTCAACCCGGCGCGGCGCTTCTTGGGCCAGCCGACGATGGAGAACAGTTGAT TGCCATTCATGTGCCAGATAATGCCGACCCAGCACCTTATCTGGTGCTGTTTGAACAAAACAACGTCGATCGCTCCAGTC TCAAGGCTGCGGGCCTCGCGCCGGGCGATATGTACGCCTTTGCCGACACCTATAATAAAAGCCTGCGCAAACGCGAAACA CCCTATGCCCTGTCGATGCGCACCGAAAATACCGTCGACATTGAGCGCGTATTGTTTGCGGGGTCCTACAAAGGCATCAC CGATCTGGTGACTAAATACGCCTGGCCCATACCCGCGTTTTACGTCACCCGGCTTTGTGCTTTCCTGCGCATTTCCCCCA ACACCGTAACCACGGCGAGCCTGCTTTTCGTAATTTTGGCATTCTGGCTGTTCTGGCAGGGACACTGGGCCGCCGGCATC GCGGCCGCATGGGTCATGACATTCCTGGATACGGTCGATGGCAAACTCGCCCGAACGACCATGACCTACTCCAACTGGGG CAATATCTACGATCATGGGATTGACCTGATCCACCCGCCCTTCTGGTACTGGGCAATCTTTACAGGTCTGCAATCAGCAC CCGCAGGCCCTTCTCAAGCGCTTCTGTTTGGTTCACTCGCAGTCATTTTGGCTGGCTATGTTCTCAACCGTCTGGAGGAA GGCGAATTCATCCGGCGGTTCGGATTTCACATTCACGTCTGGCAGCCGATTGACGGTTTCGCGCGGGAAATCACCGCGCG GCGAAATCCCAATATGCTAATCTTCATGGTCGCTGTAATGCTGGGCCAGCCGGGCTGGGGATTTGTGGCAATCGCTGTGT GGACGATCATCTTTCTTGTGTTCCACGGCGTGCGCCTGATCCAGGCCATCTTGCAGCGCTCAGCACCCGTATCCTGGCTG GAAGCCTGA
Upstream 100 bases:
>100_bases GAGTGTAACCTGCTTTGGCCTCACCTGGACGCTCCAGTGGGCGTAATCGCAGACCAATGTGCGGTCTCCGCCAAATGTTT CGTAGGTCGCATTCCGATGC
Downstream 100 bases:
>100_bases TCCCCATGACCGCAACAGCCATTTTCGATCTGGACCGTACTATCACGCGCGAAGCGACATGGACCCGCTTCCTGATTTTC GTGAACTGGAGGCGGCCAAC
Product: putative phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidyltransferase; Phosphatidylglycerophosphate Synthase
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTLILHRPLGHDLLVAVPEHLRVICPMSQNPVSVRLLGELPARLWGLDLAEWQRRAWSKAGAGQIDQAAGRLLVGIEWVL SPSLQRNLLAQPGAALLGPADDGEQLIAIHVPDNADPAPYLVLFEQNNVDRSSLKAAGLAPGDMYAFADTYNKSLRKRET PYALSMRTENTVDIERVLFAGSYKGITDLVTKYAWPIPAFYVTRLCAFLRISPNTVTTASLLFVILAFWLFWQGHWAAGI AAAWVMTFLDTVDGKLARTTMTYSNWGNIYDHGIDLIHPPFWYWAIFTGLQSAPAGPSQALLFGSLAVILAGYVLNRLEE GEFIRRFGFHIHVWQPIDGFAREITARRNPNMLIFMVAVMLGQPGWGFVAIAVWTIIFLVFHGVRLIQAILQRSAPVSWL EA
Sequences:
>Translated_402_residues MTLILHRPLGHDLLVAVPEHLRVICPMSQNPVSVRLLGELPARLWGLDLAEWQRRAWSKAGAGQIDQAAGRLLVGIEWVL SPSLQRNLLAQPGAALLGPADDGEQLIAIHVPDNADPAPYLVLFEQNNVDRSSLKAAGLAPGDMYAFADTYNKSLRKRET PYALSMRTENTVDIERVLFAGSYKGITDLVTKYAWPIPAFYVTRLCAFLRISPNTVTTASLLFVILAFWLFWQGHWAAGI AAAWVMTFLDTVDGKLARTTMTYSNWGNIYDHGIDLIHPPFWYWAIFTGLQSAPAGPSQALLFGSLAVILAGYVLNRLEE GEFIRRFGFHIHVWQPIDGFAREITARRNPNMLIFMVAVMLGQPGWGFVAIAVWTIIFLVFHGVRLIQAILQRSAPVSWL EA >Mature_401_residues TLILHRPLGHDLLVAVPEHLRVICPMSQNPVSVRLLGELPARLWGLDLAEWQRRAWSKAGAGQIDQAAGRLLVGIEWVLS PSLQRNLLAQPGAALLGPADDGEQLIAIHVPDNADPAPYLVLFEQNNVDRSSLKAAGLAPGDMYAFADTYNKSLRKRETP YALSMRTENTVDIERVLFAGSYKGITDLVTKYAWPIPAFYVTRLCAFLRISPNTVTTASLLFVILAFWLFWQGHWAAGIA AAWVMTFLDTVDGKLARTTMTYSNWGNIYDHGIDLIHPPFWYWAIFTGLQSAPAGPSQALLFGSLAVILAGYVLNRLEEG EFIRRFGFHIHVWQPIDGFAREITARRNPNMLIFMVAVMLGQPGWGFVAIAVWTIIFLVFHGVRLIQAILQRSAPVSWLE A
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44784; Mature: 44652
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLILHRPLGHDLLVAVPEHLRVICPMSQNPVSVRLLGELPARLWGLDLAEWQRRAWSKA CEEEEECCCCCCCEEECCCHHEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCC GAGQIDQAAGRLLVGIEWVLSPSLQRNLLAQPGAALLGPADDGEQLIAIHVPDNADPAPY CCCCHHHHCCCEEEEHHHHHCCHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCE LVLFEQNNVDRSSLKAAGLAPGDMYAFADTYNKSLRKRETPYALSMRTENTVDIERVLFA EEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHC GSYKGITDLVTKYAWPIPAFYVTRLCAFLRISPNTVTTASLLFVILAFWLFWQGHWAAGI CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH AAAWVMTFLDTVDGKLARTTMTYSNWGNIYDHGIDLIHPPFWYWAIFTGLQSAPAGPSQA HHHHHHHHHHHCCCCHHHEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHH LLFGSLAVILAGYVLNRLEEGEFIRRFGFHIHVWQPIDGFAREITARRNPNMLIFMVAVM HHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHH LGQPGWGFVAIAVWTIIFLVFHGVRLIQAILQRSAPVSWLEA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure TLILHRPLGHDLLVAVPEHLRVICPMSQNPVSVRLLGELPARLWGLDLAEWQRRAWSKA EEEEECCCCCCCEEECCCHHEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCC GAGQIDQAAGRLLVGIEWVLSPSLQRNLLAQPGAALLGPADDGEQLIAIHVPDNADPAPY CCCCHHHHCCCEEEEHHHHHCCHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCE LVLFEQNNVDRSSLKAAGLAPGDMYAFADTYNKSLRKRETPYALSMRTENTVDIERVLFA EEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHC GSYKGITDLVTKYAWPIPAFYVTRLCAFLRISPNTVTTASLLFVILAFWLFWQGHWAAGI CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH AAAWVMTFLDTVDGKLARTTMTYSNWGNIYDHGIDLIHPPFWYWAIFTGLQSAPAGPSQA HHHHHHHHHHHCCCCHHHEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHH LLFGSLAVILAGYVLNRLEEGEFIRRFGFHIHVWQPIDGFAREITARRNPNMLIFMVAVM HHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHH LGQPGWGFVAIAVWTIIFLVFHGVRLIQAILQRSAPVSWLEA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA