| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799011
Identifier: 114799011
GI number: 114799011
Start: 1613002
End: 1613682
Strand: Reverse
Name: 114799011
Synonym: HNE_1580
Alternate gene names: NA
Gene position: 1613682-1613002 (Counterclockwise)
Preceding gene: 114800452
Following gene: 114798017
Centisome position: 43.55
GC content: 57.12
Gene sequence:
>681_bases ATGACCGCAACAGCCATTTTCGATCTGGACCGTACTATCACGCGCGAAGCGACATGGACCCGCTTCCTGATTTTCGTGAA CTGGAGGCGGCCAACATTCTGGCTTTTCCTTCTGCGCATTATGGCCCAAGGTGCCGCCCACAAGCTGGGCATTGTCAGCC GCGACTCTGTTAAAGTGTTGAGCCTCAGAACGCTCTCTCATCTGACGCATGCTGAGGCGCAATCGGCGGCGGCTGCGTTC ATTTCCAAAGAGGTAAAGTCCGGCCTGCGGCCAGGTGCCTTGGAAGCAATCGCATGGCACGCCGACCGCGGTGACCGGCT GATCATCGCAACCGCCTCCGTTGATCTGGTTGCGGACGAACTGGCGCGGGCACTCGGCTTCCACGAAGTGATTGCCAGCC GCTTGGACTGGTCAGGCCCGTCCGCGCCGCTGCTTTCAGGGGCGAACTGCTATGGTCACGAAAAGCTTCTTCGCATTGAA GCGCACGGCATTTCCCGTTCCGGATTTGCCTACAGCGATCATGTATCGGACCTGCCCATGCTGCTGAATTCCGATTTTCC GGTGGCGGTGAACCCGTCCTCCGGACTCAGGAAAGCGGCGCAGAAACTCCACATAACCATTGCTGACTTCAACACAGTTG AAATTGGATTCCTTTCAGACAAAGTGACTGTTTCCGCATGA
Upstream 100 bases:
>100_bases CTGTGTGGACGATCATCTTTCTTGTGTTCCACGGCGTGCGCCTGATCCAGGCCATCTTGCAGCGCTCAGCACCCGTATCC TGGCTGGAAGCCTGATCCCC
Downstream 100 bases:
>100_bases AAGCCATTCTTCTGAGCGCCGGCCGCGGCTCTCGCCTTCTGCCTTTGACCGAATCCCGTCCGAAATGCCTGCTACCGGTT CAGGCCACGACGCTGCTTGG
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IB Hydrolase TIGR; Phosphoserine Phosphatase; Phosphoserine Phosphatase SerB; Hydrolase; HAD Superfamily Subfamily IB Hydrolase
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTATAIFDLDRTITREATWTRFLIFVNWRRPTFWLFLLRIMAQGAAHKLGIVSRDSVKVLSLRTLSHLTHAEAQSAAAAF ISKEVKSGLRPGALEAIAWHADRGDRLIIATASVDLVADELARALGFHEVIASRLDWSGPSAPLLSGANCYGHEKLLRIE AHGISRSGFAYSDHVSDLPMLLNSDFPVAVNPSSGLRKAAQKLHITIADFNTVEIGFLSDKVTVSA
Sequences:
>Translated_226_residues MTATAIFDLDRTITREATWTRFLIFVNWRRPTFWLFLLRIMAQGAAHKLGIVSRDSVKVLSLRTLSHLTHAEAQSAAAAF ISKEVKSGLRPGALEAIAWHADRGDRLIIATASVDLVADELARALGFHEVIASRLDWSGPSAPLLSGANCYGHEKLLRIE AHGISRSGFAYSDHVSDLPMLLNSDFPVAVNPSSGLRKAAQKLHITIADFNTVEIGFLSDKVTVSA >Mature_225_residues TATAIFDLDRTITREATWTRFLIFVNWRRPTFWLFLLRIMAQGAAHKLGIVSRDSVKVLSLRTLSHLTHAEAQSAAAAFI SKEVKSGLRPGALEAIAWHADRGDRLIIATASVDLVADELARALGFHEVIASRLDWSGPSAPLLSGANCYGHEKLLRIEA HGISRSGFAYSDHVSDLPMLLNSDFPVAVNPSSGLRKAAQKLHITIADFNTVEIGFLSDKVTVSA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24672; Mature: 24540
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAIFDLDRTITREATWTRFLIFVNWRRPTFWLFLLRIMAQGAAHKLGIVSRDSVKVL CCCEEEEECCHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHEEEECCCCEEEE SLRTLSHLTHAEAQSAAAAFISKEVKSGLRPGALEAIAWHADRGDRLIIATASVDLVADE EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEEECCHHHHHHH LARALGFHEVIASRLDWSGPSAPLLSGANCYGHEKLLRIEAHGISRSGFAYSDHVSDLPM HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHH LLNSDFPVAVNPSSGLRKAAQKLHITIADFNTVEIGFLSDKVTVSA HHCCCCCEEECCCHHHHHHHHHEEEEEECCCEEEEEEECCEEEECC >Mature Secondary Structure TATAIFDLDRTITREATWTRFLIFVNWRRPTFWLFLLRIMAQGAAHKLGIVSRDSVKVL CCEEEEECCHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHEEEECCCCEEEE SLRTLSHLTHAEAQSAAAAFISKEVKSGLRPGALEAIAWHADRGDRLIIATASVDLVADE EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCEEEEEECCHHHHHHH LARALGFHEVIASRLDWSGPSAPLLSGANCYGHEKLLRIEAHGISRSGFAYSDHVSDLPM HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCHH LLNSDFPVAVNPSSGLRKAAQKLHITIADFNTVEIGFLSDKVTVSA HHCCCCCEEECCCHHHHHHHHHEEEEEECCCEEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA