| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ampC [C]
Identifier: 114800442
GI number: 114800442
Start: 1140464
End: 1141603
Strand: Direct
Name: ampC [C]
Synonym: HNE_1129
Alternate gene names: 114800442
Gene position: 1140464-1141603 (Clockwise)
Preceding gene: 114797107
Following gene: 114799701
Centisome position: 30.78
GC content: 65.44
Gene sequence:
>1140_bases ATGAGCCAGACCGAAATCCACGGCAGCGTGGAGGCGCGCTTTGCGCCCGTCCGCGACGCCTTCGCGCAGAACTTCACCAA TGGCGGCGAAAACGGCGCCGCCTTCTGCATGACGCTGGAGGGCAAGCCCATCGTCGACATCTGGGGCGGCTACGCAGACG AAGAACAGACCAGGCCCTGGCAGAAGGGCACGCTCGTCAACGTCTACTCCACCACCAAGACGATGACCGCCCTCACCGCC CTCTTTCTGGCAGACAAGGGCGCGCTGAAGTTTGAAGACCCCGTCGCCAAATACTGGCCCGAATTTGCCGCCGCCGGAAA GGCAGACGTCACCGTCGCCCATCTGATGAGCCACTCAGCCGGCCTCTCGGGCTGGAAGGAGCCGATTGTCCGCGAAGACC TCTACGATTGGGAAAAGGCCACCAGCCTGCTCGCGGCCCAGGAACCCTACTGGAAACCCGGCAGCGCGCCGGGCTACCAC GCCATGACGCAGGGCTATCTCGTCGGTGAAGTCATCCGCCGCGTTGCGGGCGAAACAGTCGGCACCGTCTTCCGCAAGGA AATCGCCGGACCGCTGGGTGCAGACTTCCACATTGGCCTTCCGGCTACGGAAGATCACCGCGTCGCCGATCTCACGCCCC CGCCGCCCGGCGCGGGCATGGGCGAGGGCGCGGTTGATCCCCTCATCATGAACCTCATGAACCCGCCCATCAATCCGCTG GATACGCGCACCCGCGCCTGGCGCGCCGCTGAAATCCCGGCCGCAGGCGGCACAGGCAATGCCCGCTCCGTCGCGCTCGT CCACACGATCCTTGCCAATGGCGGCTATGCAAACGGCAAGCAGATCATGTCCGAGGCCGGCTGCCGCAAGGCTTTGGAAT TCCAGATCGAGGGCGAAGACAAGATCCTCCGCGTCCCCGTCCGCTATGGCCTCGGCTTCGGCCTGCCCGGCGGCATCGCA AACTTTCCCAACCCCAACACCATCTTCTGGGGCGGCTATGGCGGCTCCCTCGCCGTCATCGACATGGACCAGCGCGCCAC CTACGCCTACGTCATGAACAAGATGGCCCCCACCACCACGGGCGACCTGCGCGCCTTCGGCATGCTCATGGCCGCCTGGC AGGTGTTCATGGCGGGGTGA
Upstream 100 bases:
>100_bases GCCCCCGCGTCAGCCTTGCCAGCTTTCCGCAGCTGGCTTACCCAAATCGCTGAAACAGACCTGCCCATGAAGGCAGGCCA TATCCTTTTGGGGGAAACCA
Downstream 100 bases:
>100_bases TCCGCGCAGCTTGGCTTCCATGGGGCGCTCCCGTATAGGAGCGCCCCATGGCTACGTTCCCGTTTGAAATTTCCGCCCGT GAGGGTAAGGCGCGCACCGG
Product: putative esterase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: Esterase; Carboxylesterase; Beta-Lactamase Class C; Esterase/Lipase LipP; Esterase A; Beta-Lactamase Family Protein; Esterase/Lipase/Beta-Lactamase; Lactone Hydrolase; Lipase LipE; Beta-Lactamase Protein; Esterase LipL; Secreted Protein; Lipase LipD; Lipase/Esterase/Beta-Lactamase; Beta-N-Acetylglucosaminidase; Fusion Of Enoyl-CoA Hydratase; Beta-Lactamase-Like Protein; Hydrolase; Esterase/Lipase; Carboxylesterase EstC; Serine Hydrolase; Beta-Lactamase Family
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MSQTEIHGSVEARFAPVRDAFAQNFTNGGENGAAFCMTLEGKPIVDIWGGYADEEQTRPWQKGTLVNVYSTTKTMTALTA LFLADKGALKFEDPVAKYWPEFAAAGKADVTVAHLMSHSAGLSGWKEPIVREDLYDWEKATSLLAAQEPYWKPGSAPGYH AMTQGYLVGEVIRRVAGETVGTVFRKEIAGPLGADFHIGLPATEDHRVADLTPPPPGAGMGEGAVDPLIMNLMNPPINPL DTRTRAWRAAEIPAAGGTGNARSVALVHTILANGGYANGKQIMSEAGCRKALEFQIEGEDKILRVPVRYGLGFGLPGGIA NFPNPNTIFWGGYGGSLAVIDMDQRATYAYVMNKMAPTTTGDLRAFGMLMAAWQVFMAG
Sequences:
>Translated_379_residues MSQTEIHGSVEARFAPVRDAFAQNFTNGGENGAAFCMTLEGKPIVDIWGGYADEEQTRPWQKGTLVNVYSTTKTMTALTA LFLADKGALKFEDPVAKYWPEFAAAGKADVTVAHLMSHSAGLSGWKEPIVREDLYDWEKATSLLAAQEPYWKPGSAPGYH AMTQGYLVGEVIRRVAGETVGTVFRKEIAGPLGADFHIGLPATEDHRVADLTPPPPGAGMGEGAVDPLIMNLMNPPINPL DTRTRAWRAAEIPAAGGTGNARSVALVHTILANGGYANGKQIMSEAGCRKALEFQIEGEDKILRVPVRYGLGFGLPGGIA NFPNPNTIFWGGYGGSLAVIDMDQRATYAYVMNKMAPTTTGDLRAFGMLMAAWQVFMAG >Mature_378_residues SQTEIHGSVEARFAPVRDAFAQNFTNGGENGAAFCMTLEGKPIVDIWGGYADEEQTRPWQKGTLVNVYSTTKTMTALTAL FLADKGALKFEDPVAKYWPEFAAAGKADVTVAHLMSHSAGLSGWKEPIVREDLYDWEKATSLLAAQEPYWKPGSAPGYHA MTQGYLVGEVIRRVAGETVGTVFRKEIAGPLGADFHIGLPATEDHRVADLTPPPPGAGMGEGAVDPLIMNLMNPPINPLD TRTRAWRAAEIPAAGGTGNARSVALVHTILANGGYANGKQIMSEAGCRKALEFQIEGEDKILRVPVRYGLGFGLPGGIAN FPNPNTIFWGGYGGSLAVIDMDQRATYAYVMNKMAPTTTGDLRAFGMLMAAWQVFMAG
Specific function: This Protein Is A Serine Beta-Lactamase With A Substrate Specificity For Cephalosporins. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790593, Length=182, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17535191, Length=378, Percent_Identity=34.1269841269841, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71983659, Length=376, Percent_Identity=35.1063829787234, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71983666, Length=292, Percent_Identity=38.3561643835616, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17538001, Length=385, Percent_Identity=32.4675324675325, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17535177, Length=398, Percent_Identity=33.1658291457286, Blast_Score=190, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17538474, Length=388, Percent_Identity=29.1237113402062, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71990590, Length=387, Percent_Identity=27.1317829457364, Blast_Score=118, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 40643; Mature: 40511
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTEIHGSVEARFAPVRDAFAQNFTNGGENGAAFCMTLEGKPIVDIWGGYADEEQTRPW CCCCCCCCCHHEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHCCCC QKGTLVNVYSTTKTMTALTALFLADKGALKFEDPVAKYWPEFAAAGKADVTVAHLMSHSA CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHC GLSGWKEPIVREDLYDWEKATSLLAAQEPYWKPGSAPGYHAMTQGYLVGEVIRRVAGETV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GTVFRKEIAGPLGADFHIGLPATEDHRVADLTPPPPGAGMGEGAVDPLIMNLMNPPINPL HHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC DTRTRAWRAAEIPAAGGTGNARSVALVHTILANGGYANGKQIMSEAGCRKALEFQIEGED CCHHHHHECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCC KILRVPVRYGLGFGLPGGIANFPNPNTIFWGGYGGSLAVIDMDQRATYAYVMNKMAPTTT CEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC GDLRAFGMLMAAWQVFMAG CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQTEIHGSVEARFAPVRDAFAQNFTNGGENGAAFCMTLEGKPIVDIWGGYADEEQTRPW CCCCCCCCHHEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCHHCCCC QKGTLVNVYSTTKTMTALTALFLADKGALKFEDPVAKYWPEFAAAGKADVTVAHLMSHSA CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCCCHHHHHHHHHHC GLSGWKEPIVREDLYDWEKATSLLAAQEPYWKPGSAPGYHAMTQGYLVGEVIRRVAGETV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GTVFRKEIAGPLGADFHIGLPATEDHRVADLTPPPPGAGMGEGAVDPLIMNLMNPPINPL HHHHHHHHCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC DTRTRAWRAAEIPAAGGTGNARSVALVHTILANGGYANGKQIMSEAGCRKALEFQIEGED CCHHHHHECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCC KILRVPVRYGLGFGLPGGIANFPNPNTIFWGGYGGSLAVIDMDQRATYAYVMNKMAPTTT CEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCC GDLRAFGMLMAAWQVFMAG CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA