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The map label for this gene is 114800438

Identifier: 114800438

GI number: 114800438

Start: 3391323

End: 3391955

Strand: Direct

Name: 114800438

Synonym: HNE_3223

Alternate gene names: NA

Gene position: 3391323-3391955 (Clockwise)

Preceding gene: 114799686

Following gene: 114797603

Centisome position: 91.53

GC content: 61.77

Gene sequence:

>633_bases
ATGACCACACCCATGACCGCCACGCCCGAGCGCACATTGCTGCAGACGATCGAACTTCTGGCGGAGGCTGCGCCGGAAGA
AGGCTTCTCCCTGCGCGAAATCTTTGACCGGCTGGACGAGAGCGCTTTTGGCGCGGGCCTCTTTCTGCTGGCCCTGCCCT
GCTGCATTCCGTTTCTGTATGGCGTGCCGCAGGTGGTGGCGTTGCCGATGCTGGCGCTGGCTTTCCAAATGGTGATCGGG
CGTGAAGAACCCTGGTTGCCTGCCAAACTTGCCGCCCGGAAAATCGACCGGAAGGGCTTGACCCAGATGGCCCAGGGCGG
GCGCAAATGGTTTGGCTGGATCGAGGCGATCATCCGCCCGCGCCTGAGCTTCATCACCGGGCGCAATTCAGAACGGGTCA
TCGGGCTGTTCCTGTTCATCTTCAGCGCCTCGATCCTGGTTCCCCTGCCAATGACCAACACCGTGCCGGGCATGGCCGTG
GCGATTACGGCTTTTGGCCTGATGCAAAAGGATGGTCTGGCTGTGATGGGCGGCATTGTGCTGGGCACATTCTGGGTTGG
CGCGCTGATCACCGGAGCGTTCCTCGGCCTCAACATCATCACGCAGATTTCAACCGCCCTGCTGGGCTCGTGA

Upstream 100 bases:

>100_bases
CGTCTACCATTCCACCACAGGGGCTCCCGTGCAGGACGGGCAAACTCCTGCCGCAGAGGGAAGTGATATGTCAATCTCTC
TGCTATAGTCTGAGGCTATT

Downstream 100 bases:

>100_bases
CACGCCGCCGCATTGCGTTGTGAGGGGTTTCCCCCCGAAGCTCCAATTCATGCAGCTGCTTACGACTGCCCTGACCGGAT
GGCGCTGGCCCGCCTTAGCC

Product: ExoD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTTPMTATPERTLLQTIELLAEAAPEEGFSLREIFDRLDESAFGAGLFLLALPCCIPFLYGVPQVVALPMLALAFQMVIG
REEPWLPAKLAARKIDRKGLTQMAQGGRKWFGWIEAIIRPRLSFITGRNSERVIGLFLFIFSASILVPLPMTNTVPGMAV
AITAFGLMQKDGLAVMGGIVLGTFWVGALITGAFLGLNIITQISTALLGS

Sequences:

>Translated_210_residues
MTTPMTATPERTLLQTIELLAEAAPEEGFSLREIFDRLDESAFGAGLFLLALPCCIPFLYGVPQVVALPMLALAFQMVIG
REEPWLPAKLAARKIDRKGLTQMAQGGRKWFGWIEAIIRPRLSFITGRNSERVIGLFLFIFSASILVPLPMTNTVPGMAV
AITAFGLMQKDGLAVMGGIVLGTFWVGALITGAFLGLNIITQISTALLGS
>Mature_209_residues
TTPMTATPERTLLQTIELLAEAAPEEGFSLREIFDRLDESAFGAGLFLLALPCCIPFLYGVPQVVALPMLALAFQMVIGR
EEPWLPAKLAARKIDRKGLTQMAQGGRKWFGWIEAIIRPRLSFITGRNSERVIGLFLFIFSASILVPLPMTNTVPGMAVA
ITAFGLMQKDGLAVMGGIVLGTFWVGALITGAFLGLNIITQISTALLGS

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 22683; Mature: 22552

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPMTATPERTLLQTIELLAEAAPEEGFSLREIFDRLDESAFGAGLFLLALPCCIPFLY
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVPQVVALPMLALAFQMVIGREEPWLPAKLAARKIDRKGLTQMAQGGRKWFGWIEAIIRP
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RLSFITGRNSERVIGLFLFIFSASILVPLPMTNTVPGMAVAITAFGLMQKDGLAVMGGIV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
LGTFWVGALITGAFLGLNIITQISTALLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPMTATPERTLLQTIELLAEAAPEEGFSLREIFDRLDESAFGAGLFLLALPCCIPFLY
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVPQVVALPMLALAFQMVIGREEPWLPAKLAARKIDRKGLTQMAQGGRKWFGWIEAIIRP
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RLSFITGRNSERVIGLFLFIFSASILVPLPMTNTVPGMAVAITAFGLMQKDGLAVMGGIV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
LGTFWVGALITGAFLGLNIITQISTALLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]