| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800371
Identifier: 114800371
GI number: 114800371
Start: 364480
End: 365775
Strand: Reverse
Name: 114800371
Synonym: HNE_0374
Alternate gene names: NA
Gene position: 365775-364480 (Counterclockwise)
Preceding gene: 114797409
Following gene: 114799612
Centisome position: 9.87
GC content: 65.35
Gene sequence:
>1296_bases ATGGCGTTCGAGGGAAAGACACAAGGCCCGGAGAGACCCTCCGAGCTTGAAGGCAAGACACAGACCGGGCGGCGCTGTTT CGTCATCCTGCCCTATCCGGCCAGCGATGAAGACAGCCAGGCGCCAGACTTTGACGCGGTGTTTGAAGATCTCATCCGCC CGGTCATCGAGGATCTGAACCTCGACATCATCCGCGCCGACCGGGTGAGCCGTTCCGGCCTCATCCATAAGGAGATGATC GAGAACCTGCTGGAGGCCGATGTGGTGATTGCGGACGTCACCCTCGGCTCGCCCGACGTGTTCTTCGAACTCGGCATCCG CCAGACGGCGCGACGGGCGGGCACGGTTATCCTGCGCCATGCCCGCTCCACGGCGCCTTTCTCCATCTCCGGCATGCGCG CGGTCGACTATGAACTTGAAGCGCGCGGGGGCATCTCGCGCCAGCAGGTGATCGAAGACTGCCGCACCTTGCTGCGCACG CATGTCCGTAACAGCCTGGACAATCCGAGCACGGACAGCCTCGTCCACACGCTGATGCCCGGCATGGAAGTCTCCCTGCC CGGCCGCATCATTCCCGACCGGCGCTACATCTCCTACCGGGTCGGCCCGCAGGGCCCCAAGCCTTCCAAGCTGATCGAGC TGGTGACCGGAGACCTCGCCGACATTGACGACATTGATGTCTGGGTGAACCCGGAAAACACCCGGATGGAATTTGGCCGT TTCCATGAAGCCTCGGTGTCGGCGGCGATCCGCTATCTCGGCTCCAAGCGCGACCGGCACGGATTTGTACGCGACGACAT GATCGCCCGCCTGCTGGCCCAGCGCGCCGGTGGCCACCAGCTGCGCACCGGGGTTGAGCCGGCCACCGCCCTTCTCACCG AGCCGGGCATGCTGCGCAAAACCAACAAGGTCCGCCTTCTGGTCCACACGGCCGCCTATCAGGGCGAGCCGGGCCGGGGC TACCGCCTCATCGGGGCCTATCGCAAATGCGTCGGCAACGCGCTGGCGACCATCGATGCGGAGAACAACCGGTTCGGCGC AAAGATGAGCCCGAAAAAGGCGCTCAAATCCGTGCTGATCCCCCTCTTCGGCACGCGCAGCGGCGGGGAGAGCCCGCATG AGCGCGCGCAAGGCCTGATCCAGACTGCCCAGCAATACCTGCTCAACTGGCCGGACTCGAAGATCGAACGCGCCGTCTTC CTGTGCCACACCCAGGCCGACCTGGAACTCGCCCAGGCCGCGCTCTATCGTCTCGGCCTGCGCGCGGTGTCGGTGCCCAG GGGCGGACGGGCTTAG
Upstream 100 bases:
>100_bases CGTTTGACTGAGGGTGCCCCGGACACGCCAGTCCGGGCGGGCAACGTGTGTGCCTGGGGGCGGCGTCGGCAGTGACGGCA AGAGGCAGGGCTTCGTGGGA
Downstream 100 bases:
>100_bases GTTTCCTGTGAGTTTGCGCCGCTGCGATGATATGCACATCTTGCGGCGTTTACCTATTTTAAGCACTATATGTGGTGTGT TGAATGTCCCGAAGGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAFEGKTQGPERPSELEGKTQTGRRCFVILPYPASDEDSQAPDFDAVFEDLIRPVIEDLNLDIIRADRVSRSGLIHKEMI ENLLEADVVIADVTLGSPDVFFELGIRQTARRAGTVILRHARSTAPFSISGMRAVDYELEARGGISRQQVIEDCRTLLRT HVRNSLDNPSTDSLVHTLMPGMEVSLPGRIIPDRRYISYRVGPQGPKPSKLIELVTGDLADIDDIDVWVNPENTRMEFGR FHEASVSAAIRYLGSKRDRHGFVRDDMIARLLAQRAGGHQLRTGVEPATALLTEPGMLRKTNKVRLLVHTAAYQGEPGRG YRLIGAYRKCVGNALATIDAENNRFGAKMSPKKALKSVLIPLFGTRSGGESPHERAQGLIQTAQQYLLNWPDSKIERAVF LCHTQADLELAQAALYRLGLRAVSVPRGGRA
Sequences:
>Translated_431_residues MAFEGKTQGPERPSELEGKTQTGRRCFVILPYPASDEDSQAPDFDAVFEDLIRPVIEDLNLDIIRADRVSRSGLIHKEMI ENLLEADVVIADVTLGSPDVFFELGIRQTARRAGTVILRHARSTAPFSISGMRAVDYELEARGGISRQQVIEDCRTLLRT HVRNSLDNPSTDSLVHTLMPGMEVSLPGRIIPDRRYISYRVGPQGPKPSKLIELVTGDLADIDDIDVWVNPENTRMEFGR FHEASVSAAIRYLGSKRDRHGFVRDDMIARLLAQRAGGHQLRTGVEPATALLTEPGMLRKTNKVRLLVHTAAYQGEPGRG YRLIGAYRKCVGNALATIDAENNRFGAKMSPKKALKSVLIPLFGTRSGGESPHERAQGLIQTAQQYLLNWPDSKIERAVF LCHTQADLELAQAALYRLGLRAVSVPRGGRA >Mature_430_residues AFEGKTQGPERPSELEGKTQTGRRCFVILPYPASDEDSQAPDFDAVFEDLIRPVIEDLNLDIIRADRVSRSGLIHKEMIE NLLEADVVIADVTLGSPDVFFELGIRQTARRAGTVILRHARSTAPFSISGMRAVDYELEARGGISRQQVIEDCRTLLRTH VRNSLDNPSTDSLVHTLMPGMEVSLPGRIIPDRRYISYRVGPQGPKPSKLIELVTGDLADIDDIDVWVNPENTRMEFGRF HEASVSAAIRYLGSKRDRHGFVRDDMIARLLAQRAGGHQLRTGVEPATALLTEPGMLRKTNKVRLLVHTAAYQGEPGRGY RLIGAYRKCVGNALATIDAENNRFGAKMSPKKALKSVLIPLFGTRSGGESPHERAQGLIQTAQQYLLNWPDSKIERAVFL CHTQADLELAQAALYRLGLRAVSVPRGGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47721; Mature: 47590
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEGKTQGPERPSELEGKTQTGRRCFVILPYPASDEDSQAPDFDAVFEDLIRPVIEDLN CCCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC LDIIRADRVSRSGLIHKEMIENLLEADVVIADVTLGSPDVFFELGIRQTARRAGTVILRH CEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHEEE ARSTAPFSISGMRAVDYELEARGGISRQQVIEDCRTLLRTHVRNSLDNPSTDSLVHTLMP CCCCCCEEECCCEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GMEVSLPGRIIPDRRYISYRVGPQGPKPSKLIELVTGDLADIDDIDVWVNPENTRMEFGR CCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHCC FHEASVSAAIRYLGSKRDRHGFVRDDMIARLLAQRAGGHQLRTGVEPATALLTEPGMLRK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCCCC TNKVRLLVHTAAYQGEPGRGYRLIGAYRKCVGNALATIDAENNRFGAKMSPKKALKSVLI CCCEEEEEEEECCCCCCCCCEEHHHHHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHH PLFGTRSGGESPHERAQGLIQTAQQYLLNWPDSKIERAVFLCHTQADLELAQAALYRLGL HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECHHHHHHHHHHHHHHCC RAVSVPRGGRA CEEECCCCCCC >Mature Secondary Structure AFEGKTQGPERPSELEGKTQTGRRCFVILPYPASDEDSQAPDFDAVFEDLIRPVIEDLN CCCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC LDIIRADRVSRSGLIHKEMIENLLEADVVIADVTLGSPDVFFELGIRQTARRAGTVILRH CEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHEEE ARSTAPFSISGMRAVDYELEARGGISRQQVIEDCRTLLRTHVRNSLDNPSTDSLVHTLMP CCCCCCEEECCCEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GMEVSLPGRIIPDRRYISYRVGPQGPKPSKLIELVTGDLADIDDIDVWVNPENTRMEFGR CCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHCC FHEASVSAAIRYLGSKRDRHGFVRDDMIARLLAQRAGGHQLRTGVEPATALLTEPGMLRK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCCCC TNKVRLLVHTAAYQGEPGRGYRLIGAYRKCVGNALATIDAENNRFGAKMSPKKALKSVLI CCCEEEEEEEECCCCCCCCCEEHHHHHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHH PLFGTRSGGESPHERAQGLIQTAQQYLLNWPDSKIERAVFLCHTQADLELAQAALYRLGL HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECHHHHHHHHHHHHHHCC RAVSVPRGGRA CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA