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The map label for this gene is yfgC [C]

Identifier: 114800353

GI number: 114800353

Start: 2856317

End: 2857753

Strand: Direct

Name: yfgC [C]

Synonym: HNE_2696

Alternate gene names: 114800353

Gene position: 2856317-2857753 (Clockwise)

Preceding gene: 114797566

Following gene: 114799585

Centisome position: 77.09

GC content: 63.26

Gene sequence:

>1437_bases
GTGGCACATAAAGTCATCAAGATTGTAACCGCTGTTGCCGCTTCGGCGATCATGGCGCTCAGCGCATCGGCGCAGAGCAT
CATCCGCGACGCGGAGATCGAAGAGACAATCCGCGAGTGGACCGACCCGATCCTGGAAGTGTCGGGCCTCGTGCCTGCCG
ATGTTGGCATCTACATCATCAACGACCCGTCTCTGAACGCCTTTGTCGGCAACGGACAGCGCATTCACATCCACACCGGC
CTGATGATAGCCGCCGAGACGCCCGGCCAGATCAAAGGCGTCATCGCCCACGAAACCTGCCACATTGCCTGCGGGCACAC
CGTCTCGCGCGCCCGCGCGGCGAGCGTGGCCATGCGGCCGGCGCTGCTCTCTATCGGCTTGGGGATTCTCGCCATTGCCG
CAGGTGAAGGCGGCGCCGGCGCCGCCCTGATCGGCAGCTCGCAGCAATTTGCCGCCGCGAACTTCTTTACCCACACCCGG
CCGGAAGAAGCCTCCGCTGACGCCCACGCCGTCAAATACCTGGCCGCCCTTGGCCAGTCCCCGGCGGGCATCGTCGAGTT
CTTCGAGAACTTCCGCTATCAGGAAGTGATGTCGGAAGCGCGCCGCTATCCCTATTTCCGCGCCCACCCGCTGGCATCTG
ACCGTATCCGCACAACCCGCAGCCTTGCCGAAGCGACCGGCTTGATGGACGTGCAGCCGACTGAGCGCGAGCAGAAGCAA
TACGAGATGCTGCGCGCCAAGCTGGTCGGCTTCCTGGATTCGCCTCTCAAGGTGCGGCGGGACTATCCGGCAACCGATAC
GAGCCAGCCTGCCCGCTATGCCAGGGCCATCGCCGCCTATCTGGCAGCAGACATCCAGAGCGCCATGAAGGACATCGACT
CGCTGCTCGCCGAGGAACCGGACAATCCGTATTTCCATGAACTGAAGGGCCAGATCCTGTTCGAGAGCGGCCGCGTCGCC
GAATCGGTCGAGCCGCACAAACGGTCCCTCGAGCTGAAACCTGGCCAGCCCCTCCTGCTCATCAACTATGGCCGCTCCCT
CAATGCCCGCGGCGAAGAGGGCGATTTCAAGCTGGCAGAAACGGCGCTGCGCGACGCGCTCATCGCCGAGCCGGACAATG
CCTTTGCCTGGGCACAGCTGGCGATCACGATGGAAAAGCAGGGCCAGCGTCCTGAGGCTCAGTTGGCGACCGCCGAGTCA
GCTTACTGGGTCGGCGATATTGTCCGCGCCAATGCATTTGCCCGCCGGGCCGTCGACCAACTTGATCGGGGGACGCCGAA
TTTCCGCCGGGCCGACGACATTCTGCTGATCACAGATCCGAGCAATCCCGAGAACCGTCAATTCTATGAGCGGTATAACC
GGGGGCAGCGCCTCTCGATCGACACATCCGCCAGAGAGATGCCGTTCGGCGACTTTTCGCGCCAGCAACCCTGGTAA

Upstream 100 bases:

>100_bases
GAACTCTGACAAATCCGTTAGACCGCAGACGGCGCCTCGCCATACGCTTGGCAAAGTCCTAGTCTAAACCGGTCATCGTA
ATGACCACAGGAGCCGCTTC

Downstream 100 bases:

>100_bases
AAGGGCGGGTAAACCCTCTGTGAGGATGGGTGGACGCGCCCGGCCCGGTGCCTATAGTCCGGCGAGCTGAAATCAGGGAT
TCTTCACTATGAACCGTATG

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAHKVIKIVTAVAASAIMALSASAQSIIRDAEIEETIREWTDPILEVSGLVPADVGIYIINDPSLNAFVGNGQRIHIHTG
LMIAAETPGQIKGVIAHETCHIACGHTVSRARAASVAMRPALLSIGLGILAIAAGEGGAGAALIGSSQQFAAANFFTHTR
PEEASADAHAVKYLAALGQSPAGIVEFFENFRYQEVMSEARRYPYFRAHPLASDRIRTTRSLAEATGLMDVQPTEREQKQ
YEMLRAKLVGFLDSPLKVRRDYPATDTSQPARYARAIAAYLAADIQSAMKDIDSLLAEEPDNPYFHELKGQILFESGRVA
ESVEPHKRSLELKPGQPLLLINYGRSLNARGEEGDFKLAETALRDALIAEPDNAFAWAQLAITMEKQGQRPEAQLATAES
AYWVGDIVRANAFARRAVDQLDRGTPNFRRADDILLITDPSNPENRQFYERYNRGQRLSIDTSAREMPFGDFSRQQPW

Sequences:

>Translated_478_residues
MAHKVIKIVTAVAASAIMALSASAQSIIRDAEIEETIREWTDPILEVSGLVPADVGIYIINDPSLNAFVGNGQRIHIHTG
LMIAAETPGQIKGVIAHETCHIACGHTVSRARAASVAMRPALLSIGLGILAIAAGEGGAGAALIGSSQQFAAANFFTHTR
PEEASADAHAVKYLAALGQSPAGIVEFFENFRYQEVMSEARRYPYFRAHPLASDRIRTTRSLAEATGLMDVQPTEREQKQ
YEMLRAKLVGFLDSPLKVRRDYPATDTSQPARYARAIAAYLAADIQSAMKDIDSLLAEEPDNPYFHELKGQILFESGRVA
ESVEPHKRSLELKPGQPLLLINYGRSLNARGEEGDFKLAETALRDALIAEPDNAFAWAQLAITMEKQGQRPEAQLATAES
AYWVGDIVRANAFARRAVDQLDRGTPNFRRADDILLITDPSNPENRQFYERYNRGQRLSIDTSAREMPFGDFSRQQPW
>Mature_477_residues
AHKVIKIVTAVAASAIMALSASAQSIIRDAEIEETIREWTDPILEVSGLVPADVGIYIINDPSLNAFVGNGQRIHIHTGL
MIAAETPGQIKGVIAHETCHIACGHTVSRARAASVAMRPALLSIGLGILAIAAGEGGAGAALIGSSQQFAAANFFTHTRP
EEASADAHAVKYLAALGQSPAGIVEFFENFRYQEVMSEARRYPYFRAHPLASDRIRTTRSLAEATGLMDVQPTEREQKQY
EMLRAKLVGFLDSPLKVRRDYPATDTSQPARYARAIAAYLAADIQSAMKDIDSLLAEEPDNPYFHELKGQILFESGRVAE
SVEPHKRSLELKPGQPLLLINYGRSLNARGEEGDFKLAETALRDALIAEPDNAFAWAQLAITMEKQGQRPEAQLATAESA
YWVGDIVRANAFARRAVDQLDRGTPNFRRADDILLITDPSNPENRQFYERYNRGQRLSIDTSAREMPFGDFSRQQPW

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=371, Percent_Identity=24.5283018867925, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 52514; Mature: 52383

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHKVIKIVTAVAASAIMALSASAQSIIRDAEIEETIREWTDPILEVSGLVPADVGIYII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
NDPSLNAFVGNGQRIHIHTGLMIAAETPGQIKGVIAHETCHIACGHTVSRARAASVAMRP
ECCCCEEEECCCCEEEEEECEEEEECCCCCEEEEEEECEEEEECCCHHHHHHHHHHHHHH
ALLSIGLGILAIAAGEGGAGAALIGSSQQFAAANFFTHTRPEEASADAHAVKYLAALGQS
HHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PAGIVEFFENFRYQEVMSEARRYPYFRAHPLASDRIRTTRSLAEATGLMDVQPTEREQKQ
CHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
YEMLRAKLVGFLDSPLKVRRDYPATDTSQPARYARAIAAYLAADIQSAMKDIDSLLAEEP
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNPYFHELKGQILFESGRVAESVEPHKRSLELKPGQPLLLINYGRSLNARGEEGDFKLAE
CCCHHHHCCCEEEEECCCCCCCCCCHHHCEEECCCCCEEEEECCCCCCCCCCCCCHHHHH
TALRDALIAEPDNAFAWAQLAITMEKQGQRPEAQLATAESAYWVGDIVRANAFARRAVDQ
HHHHHHHHCCCCCCEEEEEEEEEHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LDRGTPNFRRADDILLITDPSNPENRQFYERYNRGQRLSIDTSAREMPFGDFSRQQPW
HHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHKVIKIVTAVAASAIMALSASAQSIIRDAEIEETIREWTDPILEVSGLVPADVGIYII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
NDPSLNAFVGNGQRIHIHTGLMIAAETPGQIKGVIAHETCHIACGHTVSRARAASVAMRP
ECCCCEEEECCCCEEEEEECEEEEECCCCCEEEEEEECEEEEECCCHHHHHHHHHHHHHH
ALLSIGLGILAIAAGEGGAGAALIGSSQQFAAANFFTHTRPEEASADAHAVKYLAALGQS
HHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PAGIVEFFENFRYQEVMSEARRYPYFRAHPLASDRIRTTRSLAEATGLMDVQPTEREQKQ
CHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
YEMLRAKLVGFLDSPLKVRRDYPATDTSQPARYARAIAAYLAADIQSAMKDIDSLLAEEP
HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNPYFHELKGQILFESGRVAESVEPHKRSLELKPGQPLLLINYGRSLNARGEEGDFKLAE
CCCHHHHCCCEEEEECCCCCCCCCCHHHCEEECCCCCEEEEECCCCCCCCCCCCCHHHHH
TALRDALIAEPDNAFAWAQLAITMEKQGQRPEAQLATAESAYWVGDIVRANAFARRAVDQ
HHHHHHHHCCCCCCEEEEEEEEEHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LDRGTPNFRRADDILLITDPSNPENRQFYERYNRGQRLSIDTSAREMPFGDFSRQQPW
HHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]