| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is nuoN [H]
Identifier: 114800322
GI number: 114800322
Start: 745440
End: 746936
Strand: Direct
Name: nuoN [H]
Synonym: HNE_0735
Alternate gene names: 114800322
Gene position: 745440-746936 (Clockwise)
Preceding gene: 114799114
Following gene: 114797124
Centisome position: 20.12
GC content: 61.39
Gene sequence:
>1497_bases TTGGCGCATGCGCCGGTATTGCTGGTGGCAATTCCAATGCTGATTGCGCCTTTGGTGGCGATCCTGCCCAGTGGCCGGCT GGCCTGGCTGCTCGCTATGGCGACCACTGCAGTCTCTTTTTACCTCGCCATAGTCACGCTGGGCCTCGTTCAGTCTTCGC CGACGGGCATCCTGTCCTATGAGATCGGCCGGTGGCCCCCGCCGATCGGGATCGAATTCCGGACCGATGCGCTCAATGCG ATGATCCTTCTGCTGGTAACGGGCATAGGCTTTCTGGCGTCCGTGTTTTCCTGGCCAACGATTTCGTCGGAGCTTGGCAA TCATAACAAGCTCGGCATGTTCTACGCCGCGTTCCTGCTTTGCCTTGCCGGTTTGCTGGGCGTTGCCTCGACCGGGGACG CCTTCAACCTCTTCGTATTCCTCGAGATCAGCTCGCTGGCGACATATGTGATGGTTGCCATGGGCGCCCGGCGGGATCGC CGCGCGCTGCCTGCGGCTTTCAACTATCTGATCATGGGAACGCTCGGGGCGAGCTTTTACATTATCGGCATCGGCTTCCT TTATGCGGCCACCGGCACGCTCAACATGGCCGACATCGCCGACCGCCTGCCCGCGCTGACCGATAGCCGCTCGGTACAGG TCGGTTTTGCCTTCATCATCGTCGGTCTCGGCTTGAAGGCTGCCATGTGGCCGCTTCACCAGTGGCTGCCCAACGCCTAT TCCTATGGCCCGAGCTTCGTGACGGTGTTCCTGTCGGCGACCGCCACCAAGGTCGCGATCTATGCGATGATCCGGTTCCT GTTCACGATCTTCCGGCCGGATTACACTTTCGAGCTTGCCAGCTTCTCCTGGATACTTGCCCCGCTCGGCATTGCGGCGA TGGTGATCTGCAGCTTTCAGGCTGTGTTCCAGACGGATGTTCGGCGCACGCTGGCCTATTCCTCGGTGGCGCAGGTTGGC TACATGCTGCTCGGTGTATCGCTGGCCACTGCGCCCGGCGTCGCGGCCGGTCTCCTGCATCTCTTCAACCACGCCCTCAT GAAAGGCGCGCTGTTCATGGCGATCGCCGGCATCGTCATGACCCATAAAGGCACCACGATCCGCGATTTCGCCGGTCTGG GTCGCACGGCGCCGTGGACCATGACGGCCTTTGCCATCGCGGGCCTCTCACTGATCGGCGTACCGCTGACGGCCGGGTTC ATGTCAAAGCTTCAGCTCGGTTACGCGCTGTTTGCCGAAGGCTGGTGGTGGGCTGTGCTGCTGGTTGTGTTCTCCAGCTT CCTGGCCGTGTTCTATGTCGGCCGCATCCTGCAGGCAGCCTTCTTCCAGCCGCCCGATAATCCAAGCAAGATCCACAAGG AGGCGCCACTTCTCATCCTTGTGCCGCTCTGGATACTTGCGCTCGCCAACCTTTATTTCGGCATCGCCGCTGACTTCCCG CTGGGACTTGCCCAGGACGGCGCAGTGGCTGCCCTCGGACTGGAGGCGTTCCGATGA
Upstream 100 bases:
>100_bases TGGAGACCGCGCTCGCTCAGGAACTCGAAGCAGCCAAAGACATCAATGAGGCTTCGGCATGATGCTCGAATCTGTGCTGA CTTCTGCGCCCGCCTGGGCG
Downstream 100 bases:
>100_bases ACCCGGAAACCCTCATTGCCTCGATCCTTGTTCTGCCGCTGCTGATTGCGGCAGGCATCGCCGCGACGGGCAAGTTCCCG AATATTCGTGAGGGCGTGAC
Product: putative monovalent cation/H+ antiporter subunit D
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MAHAPVLLVAIPMLIAPLVAILPSGRLAWLLAMATTAVSFYLAIVTLGLVQSSPTGILSYEIGRWPPPIGIEFRTDALNA MILLLVTGIGFLASVFSWPTISSELGNHNKLGMFYAAFLLCLAGLLGVASTGDAFNLFVFLEISSLATYVMVAMGARRDR RALPAAFNYLIMGTLGASFYIIGIGFLYAATGTLNMADIADRLPALTDSRSVQVGFAFIIVGLGLKAAMWPLHQWLPNAY SYGPSFVTVFLSATATKVAIYAMIRFLFTIFRPDYTFELASFSWILAPLGIAAMVICSFQAVFQTDVRRTLAYSSVAQVG YMLLGVSLATAPGVAAGLLHLFNHALMKGALFMAIAGIVMTHKGTTIRDFAGLGRTAPWTMTAFAIAGLSLIGVPLTAGF MSKLQLGYALFAEGWWWAVLLVVFSSFLAVFYVGRILQAAFFQPPDNPSKIHKEAPLLILVPLWILALANLYFGIAADFP LGLAQDGAVAALGLEAFR
Sequences:
>Translated_498_residues MAHAPVLLVAIPMLIAPLVAILPSGRLAWLLAMATTAVSFYLAIVTLGLVQSSPTGILSYEIGRWPPPIGIEFRTDALNA MILLLVTGIGFLASVFSWPTISSELGNHNKLGMFYAAFLLCLAGLLGVASTGDAFNLFVFLEISSLATYVMVAMGARRDR RALPAAFNYLIMGTLGASFYIIGIGFLYAATGTLNMADIADRLPALTDSRSVQVGFAFIIVGLGLKAAMWPLHQWLPNAY SYGPSFVTVFLSATATKVAIYAMIRFLFTIFRPDYTFELASFSWILAPLGIAAMVICSFQAVFQTDVRRTLAYSSVAQVG YMLLGVSLATAPGVAAGLLHLFNHALMKGALFMAIAGIVMTHKGTTIRDFAGLGRTAPWTMTAFAIAGLSLIGVPLTAGF MSKLQLGYALFAEGWWWAVLLVVFSSFLAVFYVGRILQAAFFQPPDNPSKIHKEAPLLILVPLWILALANLYFGIAADFP LGLAQDGAVAALGLEAFR >Mature_497_residues AHAPVLLVAIPMLIAPLVAILPSGRLAWLLAMATTAVSFYLAIVTLGLVQSSPTGILSYEIGRWPPPIGIEFRTDALNAM ILLLVTGIGFLASVFSWPTISSELGNHNKLGMFYAAFLLCLAGLLGVASTGDAFNLFVFLEISSLATYVMVAMGARRDRR ALPAAFNYLIMGTLGASFYIIGIGFLYAATGTLNMADIADRLPALTDSRSVQVGFAFIIVGLGLKAAMWPLHQWLPNAYS YGPSFVTVFLSATATKVAIYAMIRFLFTIFRPDYTFELASFSWILAPLGIAAMVICSFQAVFQTDVRRTLAYSSVAQVGY MLLGVSLATAPGVAAGLLHLFNHALMKGALFMAIAGIVMTHKGTTIRDFAGLGRTAPWTMTAFAIAGLSLIGVPLTAGFM SKLQLGYALFAEGWWWAVLLVVFSSFLAVFYVGRILQAAFFQPPDNPSKIHKEAPLLILVPLWILALANLYFGIAADFPL GLAQDGAVAALGLEAFR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo
COG id: COG0651
COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=379, Percent_Identity=25.3298153034301, Blast_Score=83, Evalue=5e-16, Organism=Escherichia coli, GI145693160, Length=383, Percent_Identity=27.9373368146214, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1788831, Length=348, Percent_Identity=27.5862068965517, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788827, Length=369, Percent_Identity=26.2872628726287, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788614, Length=412, Percent_Identity=25.9708737864078, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788613, Length=358, Percent_Identity=24.5810055865922, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788829, Length=419, Percent_Identity=23.8663484486874, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI2367154, Length=434, Percent_Identity=21.6589861751152, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 - InterPro: IPR003918 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 53384; Mature: 53253
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAPVLLVAIPMLIAPLVAILPSGRLAWLLAMATTAVSFYLAIVTLGLVQSSPTGILSY CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE EIGRWPPPIGIEFRTDALNAMILLLVTGIGFLASVFSWPTISSELGNHNKLGMFYAAFLL ECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHH CLAGLLGVASTGDAFNLFVFLEISSLATYVMVAMGARRDRRALPAAFNYLIMGTLGASFY HHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHH IIGIGFLYAATGTLNMADIADRLPALTDSRSVQVGFAFIIVGLGLKAAMWPLHQWLPNAY HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHH SYGPSFVTVFLSATATKVAIYAMIRFLFTIFRPDYTFELASFSWILAPLGIAAMVICSFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AVFQTDVRRTLAYSSVAQVGYMLLGVSLATAPGVAAGLLHLFNHALMKGALFMAIAGIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THKGTTIRDFAGLGRTAPWTMTAFAIAGLSLIGVPLTAGFMSKLQLGYALFAEGWWWAVL CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LVVFSSFLAVFYVGRILQAAFFQPPDNPSKIHKEAPLLILVPLWILALANLYFGIAADFP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC LGLAQDGAVAALGLEAFR CCCCCCCCCHHHHHHHCC >Mature Secondary Structure AHAPVLLVAIPMLIAPLVAILPSGRLAWLLAMATTAVSFYLAIVTLGLVQSSPTGILSY CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE EIGRWPPPIGIEFRTDALNAMILLLVTGIGFLASVFSWPTISSELGNHNKLGMFYAAFLL ECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHH CLAGLLGVASTGDAFNLFVFLEISSLATYVMVAMGARRDRRALPAAFNYLIMGTLGASFY HHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHH IIGIGFLYAATGTLNMADIADRLPALTDSRSVQVGFAFIIVGLGLKAAMWPLHQWLPNAY HHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCHH SYGPSFVTVFLSATATKVAIYAMIRFLFTIFRPDYTFELASFSWILAPLGIAAMVICSFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHH AVFQTDVRRTLAYSSVAQVGYMLLGVSLATAPGVAAGLLHLFNHALMKGALFMAIAGIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH THKGTTIRDFAGLGRTAPWTMTAFAIAGLSLIGVPLTAGFMSKLQLGYALFAEGWWWAVL CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LVVFSSFLAVFYVGRILQAAFFQPPDNPSKIHKEAPLLILVPLWILALANLYFGIAADFP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC LGLAQDGAVAALGLEAFR CCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA