| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800275
Identifier: 114800275
GI number: 114800275
Start: 3341939
End: 3342643
Strand: Direct
Name: 114800275
Synonym: HNE_3163
Alternate gene names: NA
Gene position: 3341939-3342643 (Clockwise)
Preceding gene: 114799687
Following gene: 114800231
Centisome position: 90.2
GC content: 61.42
Gene sequence:
>705_bases ATGGAACCCATGGGCGCTTTACCCGTTCTGAACCCAGACCTTATTACGGAAAAGTCAGGTTCCAGCATGACGCGCCCTAC TCTGTTCGAATACCGCGCCTGGCCATCCCAGGACATGCCGCACATAGAGGCGCTTCACCACCTGTTTGGCCTGGGCCTCG CCGAGATCAGGACCGACACCTACATTTTCTCTGACGCGCGCCCGAATTGGCTGATCGTGCTGCATGGCGCTGCCGAACTC GAGATTCTTGAGAAAACCGGCGAGGATGGCGTTCTGTCTGCCTGGAAAGTTGTCGCCCGGTCCGAATTCCCCCTCCGGCG CAGCGTTGTGCGAAACTTGCAGGACGCGTTTCCCACAGCCGACCTCTCGCATCGCATCCTGGTGCCGGGTGACCTTATCT CCTGGCTCGACATGAACACGGCGATGTTCACGGTCAACAAGCGCACCGTGCAGTTCCAGCGCGATGGCTGCGTGGCAGAG TTCTCGCAGATCGAGGCCGGCGACCGCCGCGCCGAGACCTTCTCCCTCATATCCAAACGGGCAGACACGGTCACCGAAGT GCTCGACCTGCTGCCCGACCCGCGGCTTGAAAATGTCGATTACGGCTCCTGGCTGAAAGGCCATCCCTGGAGCGAACAGG TTCTGGAGCCCGCGGCCAAATCCTATCGGCCGATGCCCGTCCTCGGCGCGGCCAGAGTGGCGTGA
Upstream 100 bases:
>100_bases TTTTTGTTTGTTCCTGCTGCCATCCACAGGGCAATGCATGCGCGGCATGAGCCATCGCGCGCGCCCCTGCCGCCTGTTTT GACTCTGATTTTCCACCTTC
Downstream 100 bases:
>100_bases GGGGTTTCCCTCACACCGCCTTCGGCTTGATCCCCACCGCCCGTTTCAGCATCCCGCCCAGCTCGCCAATGCCTGCGCCA TGCACGGCGCCTGCGCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MEPMGALPVLNPDLITEKSGSSMTRPTLFEYRAWPSQDMPHIEALHHLFGLGLAEIRTDTYIFSDARPNWLIVLHGAAEL EILEKTGEDGVLSAWKVVARSEFPLRRSVVRNLQDAFPTADLSHRILVPGDLISWLDMNTAMFTVNKRTVQFQRDGCVAE FSQIEAGDRRAETFSLISKRADTVTEVLDLLPDPRLENVDYGSWLKGHPWSEQVLEPAAKSYRPMPVLGAARVA
Sequences:
>Translated_234_residues MEPMGALPVLNPDLITEKSGSSMTRPTLFEYRAWPSQDMPHIEALHHLFGLGLAEIRTDTYIFSDARPNWLIVLHGAAEL EILEKTGEDGVLSAWKVVARSEFPLRRSVVRNLQDAFPTADLSHRILVPGDLISWLDMNTAMFTVNKRTVQFQRDGCVAE FSQIEAGDRRAETFSLISKRADTVTEVLDLLPDPRLENVDYGSWLKGHPWSEQVLEPAAKSYRPMPVLGAARVA >Mature_234_residues MEPMGALPVLNPDLITEKSGSSMTRPTLFEYRAWPSQDMPHIEALHHLFGLGLAEIRTDTYIFSDARPNWLIVLHGAAEL EILEKTGEDGVLSAWKVVARSEFPLRRSVVRNLQDAFPTADLSHRILVPGDLISWLDMNTAMFTVNKRTVQFQRDGCVAE FSQIEAGDRRAETFSLISKRADTVTEVLDLLPDPRLENVDYGSWLKGHPWSEQVLEPAAKSYRPMPVLGAARVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26252; Mature: 26252
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPMGALPVLNPDLITEKSGSSMTRPTLFEYRAWPSQDMPHIEALHHLFGLGLAEIRTDT CCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHCCE YIFSDARPNWLIVLHGAAELEILEKTGEDGVLSAWKVVARSEFPLRRSVVRNLQDAFPTA EEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DLSHRILVPGDLISWLDMNTAMFTVNKRTVQFQRDGCVAEFSQIEAGDRRAETFSLISKR CCCCEEEECHHHHHHHCCCEEEEEEECEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHH ADTVTEVLDLLPDPRLENVDYGSWLKGHPWSEQVLEPAAKSYRPMPVLGAARVA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEPMGALPVLNPDLITEKSGSSMTRPTLFEYRAWPSQDMPHIEALHHLFGLGLAEIRTDT CCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHCCE YIFSDARPNWLIVLHGAAELEILEKTGEDGVLSAWKVVARSEFPLRRSVVRNLQDAFPTA EEEECCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DLSHRILVPGDLISWLDMNTAMFTVNKRTVQFQRDGCVAEFSQIEAGDRRAETFSLISKR CCCCEEEECHHHHHHHCCCEEEEEEECEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHH ADTVTEVLDLLPDPRLENVDYGSWLKGHPWSEQVLEPAAKSYRPMPVLGAARVA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA