Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is pamO [H]

Identifier: 114800203

GI number: 114800203

Start: 1467367

End: 1469118

Strand: Reverse

Name: pamO [H]

Synonym: HNE_1436

Alternate gene names: 114800203

Gene position: 1469118-1467367 (Counterclockwise)

Preceding gene: 114797655

Following gene: 114799883

Centisome position: 39.65

GC content: 65.18

Gene sequence:

>1752_bases
ATGGCTGTTTCGTCTGAACGCCCGTCCGGGGACGGGCAACTGATCGATGCCCTGATCGTCGGGGCCGGCTTTGCGGGCAT
GTATATGCTGCACAAGCTGCGGGGGCTCGGCTTCAACGCGAAAGGGGTGGAGGCCGGCAGCGGCGTCGGCGGAACCTGGT
ACTGGAACCGCTATCCCGGCGCGCGCGTCGACATCCAGAGCCTGGAATACAGTTTCGGGTTTGACGAGGACCTCGAGAAA
GAATGGCGCTGGTCGGAGCGGTATGCGCCCCAGCCCGAATTGCTGAACTATGCTGAACATGTCGCCGACCGCTTCGACCT
GAAGCGCGACATCCGCTTCAATACCCGGGTGACCGCGGCCCATTGGGACGAGGCCGCGCAAGTCTGGAAGGTCGCGACGG
ATCCGGGCGAGGCGCTGCGCTGCCGCCACCTCATCCTCGCGACCGGGTGCCTTTCGGTCCCGACGGACGTGACCTTCCCC
GGCCTCGACACATTCCAGGGCGATATCTACCGTACCTCTCGCTGGCCGCACGAGGGCGTGGATTTTTCGGGCAGGCGCGT
GGGGATCATCGGCACGGGATCATCCGCGATCCAGTCCATCCCGATTATTGCGGAGCAGGCCGAACATCTGACCGTGTTCC
AGCGCACGCCGAACTATTCGATGCCGGCGCACAACGGCCCGATACCGGAAGCCGAGTTGGAGGCCTGGGCGAAAGACCCG
CGCGCCTACCGCGCGGCCTCAAGAGATACGGTCGGCGGCTTCCAGAACGAGGCCTCAGAAGCGATGGCCACCCTTACCGC
GCCAGAGGAGGTCCGCGCCGAGCTGGAGCGGCGCTGGGCCTGGGGCGGGTTTCGTATCCTGGGCGCCTTCGCTGACACGG
CGGTCGATCCCGACGCCAACCGCATCGTGCAGGACTTCATTGCCGAGAAGATCCGCGGGCAAGTCGCTGACCCGGCGGTG
GCCGACCTGCTGACACCGAAGGATCACCCGTTCGGCACCAAGCGGCCCTGCGTCGACACCGGCTATTACGCGACGTTCAA
CCGGCCAAATGTCGAGCTGGTGAACCTGCGCGCCGAGCCATTGGTGGGCTTCAATGCGCAAGGCATTGAAACCTCGAAGA
AGGCATATGCGTTCGACGCGGTTGTGCTGGCGACCGGCTTCGACGCGATGACGGGCGCTATCGACCGTATCGACCTGCGG
GGGGTGGGCGGCCGGCGCATCAAGGATCACTGGGCGGAAGGACCGCGCACCTATCTGGGGCTGATGGTTGCGGGCTTCCC
CAACATGTTCACCATCACCGGGCCGGGCAGCCCGTCCGTGCTGACCAACATGATCAATTCCATCGAGCAGCATGTCGACT
GGATCGCCGATTGCCTCGTGGCGCTGAAACAGCGCCAGCAGACCAGCATCGAGGCCTCGCCGGAAGCCGAGGCGGCGTGG
TGCCGGCATTCGACCGAAGCGGTGACGCCGACCATGCTGCCCCAGGCCAACAGCTGGTACATGGGCGCCAACGTGCCGGG
CAAGCCGCGCATGTTCATGCCGTATGCGGGCGGGCTGAACACCTACACCGAGATCTGCAACCAGGTGGCGGCAAAGGGCT
ATGAGGGTTTCATCATCCGCCAGGGCGACCGCGTGCTTTCAGAGTCGCGGGACTTTACGAGCCAGCCGGCGCCCGGGGAG
ATTCCGGAAAACCTGTTACCCATCATCGTCGAGCGCCTGATGGCAGCGGGCCTGATGCCGGACGCGACCTAG

Upstream 100 bases:

>100_bases
AATGGATCATTCCAGGCCGGCGGCCCTCGCGGCAGGCTTTATCGGGGCGCGGATTTGCGCTGTATTGAATTGACGTCCAA
TCAGCAACAAGGACACCGCT

Downstream 100 bases:

>100_bases
CGGCGGGCGCGCAGGGACCCGGGCGGGTCGCCAGGAGGCCAGCCCGCAACGTCAGAGATTAGCCCGTTTCCGCCGGTCGG
TAAAAGCCAGGCGACCGGTC

Product: putative steroid monooxygenase

Products: NA

Alternate protein names: PAMO; Baeyer-Villiger monooxygenase; BVMO [H]

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MAVSSERPSGDGQLIDALIVGAGFAGMYMLHKLRGLGFNAKGVEAGSGVGGTWYWNRYPGARVDIQSLEYSFGFDEDLEK
EWRWSERYAPQPELLNYAEHVADRFDLKRDIRFNTRVTAAHWDEAAQVWKVATDPGEALRCRHLILATGCLSVPTDVTFP
GLDTFQGDIYRTSRWPHEGVDFSGRRVGIIGTGSSAIQSIPIIAEQAEHLTVFQRTPNYSMPAHNGPIPEAELEAWAKDP
RAYRAASRDTVGGFQNEASEAMATLTAPEEVRAELERRWAWGGFRILGAFADTAVDPDANRIVQDFIAEKIRGQVADPAV
ADLLTPKDHPFGTKRPCVDTGYYATFNRPNVELVNLRAEPLVGFNAQGIETSKKAYAFDAVVLATGFDAMTGAIDRIDLR
GVGGRRIKDHWAEGPRTYLGLMVAGFPNMFTITGPGSPSVLTNMINSIEQHVDWIADCLVALKQRQQTSIEASPEAEAAW
CRHSTEAVTPTMLPQANSWYMGANVPGKPRMFMPYAGGLNTYTEICNQVAAKGYEGFIIRQGDRVLSESRDFTSQPAPGE
IPENLLPIIVERLMAAGLMPDAT

Sequences:

>Translated_583_residues
MAVSSERPSGDGQLIDALIVGAGFAGMYMLHKLRGLGFNAKGVEAGSGVGGTWYWNRYPGARVDIQSLEYSFGFDEDLEK
EWRWSERYAPQPELLNYAEHVADRFDLKRDIRFNTRVTAAHWDEAAQVWKVATDPGEALRCRHLILATGCLSVPTDVTFP
GLDTFQGDIYRTSRWPHEGVDFSGRRVGIIGTGSSAIQSIPIIAEQAEHLTVFQRTPNYSMPAHNGPIPEAELEAWAKDP
RAYRAASRDTVGGFQNEASEAMATLTAPEEVRAELERRWAWGGFRILGAFADTAVDPDANRIVQDFIAEKIRGQVADPAV
ADLLTPKDHPFGTKRPCVDTGYYATFNRPNVELVNLRAEPLVGFNAQGIETSKKAYAFDAVVLATGFDAMTGAIDRIDLR
GVGGRRIKDHWAEGPRTYLGLMVAGFPNMFTITGPGSPSVLTNMINSIEQHVDWIADCLVALKQRQQTSIEASPEAEAAW
CRHSTEAVTPTMLPQANSWYMGANVPGKPRMFMPYAGGLNTYTEICNQVAAKGYEGFIIRQGDRVLSESRDFTSQPAPGE
IPENLLPIIVERLMAAGLMPDAT
>Mature_582_residues
AVSSERPSGDGQLIDALIVGAGFAGMYMLHKLRGLGFNAKGVEAGSGVGGTWYWNRYPGARVDIQSLEYSFGFDEDLEKE
WRWSERYAPQPELLNYAEHVADRFDLKRDIRFNTRVTAAHWDEAAQVWKVATDPGEALRCRHLILATGCLSVPTDVTFPG
LDTFQGDIYRTSRWPHEGVDFSGRRVGIIGTGSSAIQSIPIIAEQAEHLTVFQRTPNYSMPAHNGPIPEAELEAWAKDPR
AYRAASRDTVGGFQNEASEAMATLTAPEEVRAELERRWAWGGFRILGAFADTAVDPDANRIVQDFIAEKIRGQVADPAVA
DLLTPKDHPFGTKRPCVDTGYYATFNRPNVELVNLRAEPLVGFNAQGIETSKKAYAFDAVVLATGFDAMTGAIDRIDLRG
VGGRRIKDHWAEGPRTYLGLMVAGFPNMFTITGPGSPSVLTNMINSIEQHVDWIADCLVALKQRQQTSIEASPEAEAAWC
RHSTEAVTPTMLPQANSWYMGANVPGKPRMFMPYAGGLNTYTEICNQVAAKGYEGFIIRQGDRVLSESRDFTSQPAPGEI
PENLLPIIVERLMAAGLMPDAT

Specific function: Catalyzes a Baeyer-Villiger oxidation reaction, i.e., the insertion of an oxygen atom into a carbon-carbon bond adjacent to a carbonyl, which converts ketones to esters. Is most efficient with phenylacetone as substrate, leading to the formation of benzyl

COG id: COG2072

COG function: function code P; Predicted flavoprotein involved in K+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-binding monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020946 [H]

Pfam domain/function: PF00743 FMO-like [H]

EC number: =1.14.13.92 [H]

Molecular weight: Translated: 64090; Mature: 63959

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSSERPSGDGQLIDALIVGAGFAGMYMLHKLRGLGFNAKGVEAGSGVGGTWYWNRYPG
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCC
ARVDIQSLEYSFGFDEDLEKEWRWSERYAPQPELLNYAEHVADRFDLKRDIRFNTRVTAA
CEEEHHHHHCCCCCCHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCHHCCEECCEEEEH
HWDEAAQVWKVATDPGEALRCRHLILATGCLSVPTDVTFPGLDTFQGDIYRTSRWPHEGV
HHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
DFSGRRVGIIGTGSSAIQSIPIIAEQAEHLTVFQRTPNYSMPAHNGPIPEAELEAWAKDP
CCCCCEEEEEECCHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
RAYRAASRDTVGGFQNEASEAMATLTAPEEVRAELERRWAWGGFRILGAFADTAVDPDAN
HHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHH
RIVQDFIAEKIRGQVADPAVADLLTPKDHPFGTKRPCVDTGYYATFNRPNVELVNLRAEP
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCC
LVGFNAQGIETSKKAYAFDAVVLATGFDAMTGAIDRIDLRGVGGRRIKDHWAEGPRTYLG
CCCCCCCCCCCCCHHHHHHEEHHHCCCHHHHCCHHCEEECCCCCCCHHHHHCCCCHHHHH
LMVAGFPNMFTITGPGSPSVLTNMINSIEQHVDWIADCLVALKQRQQTSIEASPEAEAAW
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
CRHSTEAVTPTMLPQANSWYMGANVPGKPRMFMPYAGGLNTYTEICNQVAAKGYEGFIIR
HHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
QGDRVLSESRDFTSQPAPGEIPENLLPIIVERLMAAGLMPDAT
CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVSSERPSGDGQLIDALIVGAGFAGMYMLHKLRGLGFNAKGVEAGSGVGGTWYWNRYPG
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCC
ARVDIQSLEYSFGFDEDLEKEWRWSERYAPQPELLNYAEHVADRFDLKRDIRFNTRVTAA
CEEEHHHHHCCCCCCHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCHHCCEECCEEEEH
HWDEAAQVWKVATDPGEALRCRHLILATGCLSVPTDVTFPGLDTFQGDIYRTSRWPHEGV
HHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
DFSGRRVGIIGTGSSAIQSIPIIAEQAEHLTVFQRTPNYSMPAHNGPIPEAELEAWAKDP
CCCCCEEEEEECCHHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
RAYRAASRDTVGGFQNEASEAMATLTAPEEVRAELERRWAWGGFRILGAFADTAVDPDAN
HHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHH
RIVQDFIAEKIRGQVADPAVADLLTPKDHPFGTKRPCVDTGYYATFNRPNVELVNLRAEP
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCC
LVGFNAQGIETSKKAYAFDAVVLATGFDAMTGAIDRIDLRGVGGRRIKDHWAEGPRTYLG
CCCCCCCCCCCCCHHHHHHEEHHHCCCHHHHCCHHCEEECCCCCCCHHHHHCCCCHHHHH
LMVAGFPNMFTITGPGSPSVLTNMINSIEQHVDWIADCLVALKQRQQTSIEASPEAEAAW
HHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
CRHSTEAVTPTMLPQANSWYMGANVPGKPRMFMPYAGGLNTYTEICNQVAAKGYEGFIIR
HHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
QGDRVLSESRDFTSQPAPGEIPENLLPIIVERLMAAGLMPDAT
CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA