Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114799883

Identifier: 114799883

GI number: 114799883

Start: 1463761

End: 1465443

Strand: Reverse

Name: 114799883

Synonym: HNE_1433

Alternate gene names: NA

Gene position: 1465443-1463761 (Counterclockwise)

Preceding gene: 114800203

Following gene: 114797292

Centisome position: 39.55

GC content: 64.82

Gene sequence:

>1683_bases
ATGCCACATAAGCGTTTGTTGACGGGCCTCATGGCTGGCATCTTTGTGGCTGTTGCAGCGTTCGCAGAGCCGGCCACGCC
GCCAGGTGACGAAGTGGAAGCTGTCAAGCTCGATTACGGCAATCGCCCGGACAAAGACGGGCAGTTTGCGTCAGTGGAGG
CGACGGTAGGCGATACACCCGTCCGATACTATGCGCGCGGTACCAATGTGTCGGCGCCTTTCTCGGTGCAGGTGATTGCC
GCCAGCCTGGAGCGCCCGCTGGAAGTGACGCTGCACCGCCAGAACTGGGGCAAGGTTGTCCACTCCGGATCGACCGGCCG
AGCGGGCAGCTTCGTGTTCGAGGGCCGCGCGCATGGGGATGTGGGGGTTCAGCTCACCTCACCGGGCGGCGCGCCAGCCC
GCGCCACCCTGGTGTTCTGGCAGGGCGCGCCCGCTGCGCCAAGCATGGCACGCGTCTACATTACGCCTGAGATGGCAGAC
GCTGGCATCAGTGCCACAAGCCAGGCGCGCGATAAGGCAGGCGGTCAGGGCCGAGGCGCATCTCCCGTCCTCTACGTCAT
CGCGGGCTTACTGGCGGTGATCGTGGTGTTCCTGGGCGTGATGATGCTGCGCCGGGGCAAGGGTGGGGCGGTCGCCGCAG
TGCTGATCGGCGGCCTGATGATGGCGTCGATCCATGATCCGGCCCCCGCCTATGCGCAGGGCGAGGAGGCCCCGCCAGGC
GGCGACGCCCCCAATCCGTTTGCTGTCGACAAGCCCCTGCCCGAGGTGCCCCGCGACAAGGACAAAGACGCCAGCGCCGG
AAAGCCTGACCAGGCGCCCAACCCGTTTGACGTCGACAAGCCCCTCCCCGACGTGCCACGCGATAAGGACAAGGATGCCA
GCGCTGGCAAACCTGAGGACAAGCCGGAGGACTCCCCGCCCAACCCCTTTGCGGGCGAGCCGACGAGCAGCTCGGGGCGG
CCGATTGACCTCAAGCCGGAGGATTTCGACCCGAGCAACGCGCCGAAGGACGATGCGTCGTCCGAAGACGCAGGTTCTGA
GGATATGGGCTCTGAAGACGCTGGCCCGGCGCCGGTGGATGAAGACTATGGTGATCGCCTCGCCGAAGCGGACCGGCGCA
TTGAGGACCTGAACCGCCAGGCCTCTGCCAACCGCGCGGAGATCGAACGCCTGCGCATGCTGCTGGAGTCCGACCGCGAG
ATGGAGCCGGACCCATCCAACCTGCCCCCGATGCCGCTCACCTGCCGGCCGCCCGCCGTGGACGGGGAGGATGACGAGGA
GATGAGCTCGGCCTGGGACGATTACGACGCCTGCGAGGCCTGTTACCGGGAACCCTTCCGGGAGCTTGATGATCTCCTGC
TGAATTATGAGCGCCTGCGGATCATCTATATGAGCACGGCCGATTTCGTCAGCACCGCCATCACCATGGGCGACACCGTG
CCAAAGCCCCATCAGTTCGTTGAAATGTCGTGGGCGCAGCAGAAGGCCGACATCCAGAAAAGCTTCCAGGGCACCAAGGA
CGCCTACGATGCCAAACGGTCAGAGTTCAATGCGCAGATGACCGAAGTTCTCGACGAACTCGGCCGCTGCGAGGCCGAAC
ACAACAACAATCCCATGTGGCGCTCCACCGAGGGCGAGATGTTCTACAGGACGATCAGGGCCAGTTATCAGAGGACGAAC
TGA

Upstream 100 bases:

>100_bases
ACCAGATACGCAGGTAGCGATTTTTAGTTGATCCCGAAGCTGGCCTGCGACACTTTGTCGGGCAAACTTGGCTTAACGGC
AGACATCCAGGGGATTGCTG

Downstream 100 bases:

>100_bases
TGTCTCATGTGCAGACGCTGCTGGCCGCCGCCAGCCTTATCCTGCTGGCTGCCTGTGGCGGCAGCGAAACGGCGCCCGCC
ACTCCCGAAGCGCCTGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIA
ASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMAD
AGISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG
GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGR
PIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDRE
MEPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV
PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN

Sequences:

>Translated_560_residues
MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIA
ASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMAD
AGISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG
GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGR
PIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDRE
MEPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV
PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN
>Mature_559_residues
PHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTPVRYYARGTNVSAPFSVQVIAA
SLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGDVGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADA
GISATSQARDKAGGQGRGASPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPGG
DAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPEDKPEDSPPNPFAGEPTSSSGRP
IDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVDEDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREM
EPDPSNLPPMPLTCRPPAVDGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTVP
KPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMWRSTEGEMFYRTIRASYQRTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60468; Mature: 60336

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00457 NA_SOLUT_SYMP_2 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC
VRYYARGTNVSAPFSVQVIAASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGD
EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCC
VGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADAGISATSQARDKAGGQGRGA
EEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHCCCCCCCC
SPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPEDSPPNPFAGEPTSSSGRPIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVD
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREMEPDPSNLPPMPLTCRPPAV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCC
PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMW
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
RSTEGEMFYRTIRASYQRTN
ECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PHKRLLTGLMAGIFVAVAAFAEPATPPGDEVEAVKLDYGNRPDKDGQFASVEATVGDTP
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC
VRYYARGTNVSAPFSVQVIAASLERPLEVTLHRQNWGKVVHSGSTGRAGSFVFEGRAHGD
EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCEEECCCCCCC
VGVQLTSPGGAPARATLVFWQGAPAAPSMARVYITPEMADAGISATSQARDKAGGQGRGA
EEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHCCCCCCCC
SPVLYVIAGLLAVIVVFLGVMMLRRGKGGAVAAVLIGGLMMASIHDPAPAYAQGEEAPPG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GDAPNPFAVDKPLPEVPRDKDKDASAGKPDQAPNPFDVDKPLPDVPRDKDKDASAGKPED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPEDSPPNPFAGEPTSSSGRPIDLKPEDFDPSNAPKDDASSEDAGSEDMGSEDAGPAPVD
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDYGDRLAEADRRIEDLNRQASANRAEIERLRMLLESDREMEPDPSNLPPMPLTCRPPAV
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
DGEDDEEMSSAWDDYDACEACYREPFRELDDLLLNYERLRIIYMSTADFVSTAITMGDTV
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCC
PKPHQFVEMSWAQQKADIQKSFQGTKDAYDAKRSEFNAQMTEVLDELGRCEAEHNNNPMW
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
RSTEGEMFYRTIRASYQRTN
ECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA