| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800159
Identifier: 114800159
GI number: 114800159
Start: 2847083
End: 2847790
Strand: Reverse
Name: 114800159
Synonym: HNE_2687
Alternate gene names: NA
Gene position: 2847790-2847083 (Counterclockwise)
Preceding gene: 114800172
Following gene: 114799017
Centisome position: 76.86
GC content: 68.08
Gene sequence:
>708_bases GTGGGCACGATGGTGAAGGCGGCGCCTGAAACGCGCACTTCCACACGGTCTGACACGCGCGCTTCGCCTTCCTGGATGAC GCCGCGGCCCGGCAGGGCGTCAACGGCGGTGGTGTCGCCGGTGGCGTCGATGGCGAAGGTGACGTCGAACGCCCGCTTGT ATTCGGCCGAGGGCGGCGTCTCATGGGCGACGGGCACGGTCTTCAGCTTGTCGATGAAGGATTCGGAGACGGCCGTGGTA ACGTTGGGGTCGTCGATGTCGACCGCTTCGGGCGCGGTATCGGCGGTTGCCTCTTCGGCGCCCTCCGGGGCAGAGCGCAT GGAGCGCATGGCCGGGCCTTCAGCTTCTGGGGCAGGCGCCTCTTCGCGCATGACTTCGAAGTTCAATTCTTCTTCGGTCA GCGGGGCTGTTTCACTGCGCGCTTCCGGCTCGGCTTGCATCGGCGCATCAGGCTCTACCACCGGCTCAGGCAGGGGCGCA GGCGGCGGCGGGGCAGCCTCTGTTCGGGGCGCTTCAGCGGAGGTGACGTCCGGCGGCGCGGCAGTCTCGGTCGTGTCGGG CGCGGGGGCAGAGGCAGTGGCGAGCGGCTCACCCCGAGGCAAATGGGTGTCCATCAGGGCCGCGCCGCCGATGCCGGCTG CAAGGAGACCTGCGATCACCAGAAGGATTGAAATAAAGCGCATCATGCTCGCGTCTCCCGGCCCGTAG
Upstream 100 bases:
>100_bases GATCTCGAAGGTGAGGTCATGGTCGCCGGCGCTGAGCGCGGTGACCGACCAGCGCCAGGTGTTTTCCGTCAACGGCGAGA GCGACTGAACGGGCGGTGAT
Downstream 100 bases:
>100_bases TGTGGAGCAGTGTAACAGAGTCAGCGGGCAGGGAAACTGCCCCGGCTCGCCTCATAAAACGCAATTGCGGCAGCATTGGA CACGTTGAGGCTTTCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVV TLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGA GGGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP
Sequences:
>Translated_235_residues MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVV TLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGA GGGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP >Mature_234_residues GTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGVSWATGTVFSLSMKDSETAVVT LGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGASSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAG GGGAASVRGASAEVTSGGAAVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22831; Mature: 22700
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC SWATGTVFSLSMKDSETAVVTLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGA EEECCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC SSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAGGGGAASVRGASAEVTSGGA CHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC AVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP EEEEECCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEEEEECCCC >Mature Secondary Structure GTMVKAAPETRTSTRSDTRASPSWMTPRPGRASTAVVSPVASMAKVTSNARLYSAEGGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCC SWATGTVFSLSMKDSETAVVTLGSSMSTASGAVSAVASSAPSGAERMERMAGPSASGAGA EEECCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC SSRMTSKFNSSSVSGAVSLRASGSACIGASGSTTGSGRGAGGGGAASVRGASAEVTSGGA CHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC AVSVVSGAGAEAVASGSPRGKWVSIRAAPPMPAARRPAITRRIEIKRIMLASPGP EEEEECCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA