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The map label for this gene is yfbS [C]

Identifier: 114799017

GI number: 114799017

Start: 2842669

End: 2844495

Strand: Reverse

Name: yfbS [C]

Synonym: HNE_2682

Alternate gene names: 114799017

Gene position: 2844495-2842669 (Counterclockwise)

Preceding gene: 114800159

Following gene: 114798954

Centisome position: 76.77

GC content: 62.62

Gene sequence:

>1827_bases
ATGCTCGCTCCGATCCTCGAGAGTTCGGTTTTCCAGATCAGCTTTGTCCTGATCCTTGTCGGCTTTGTATTTTTCGGGTT
CATCCGCGAGAAGATGCCCGCCGATGTGGTCGCTCTGCTGGCCATGGGCGCGTTGATGCTGACGGGCATTCTGTCGGTCA
ACGAGACGATTGGCGTGTTTTCCAACTCGGCGCCGATCACTGTGGCGGCCATGTTCATCCTGTCGGCTGCGCTCGAGCGA
ACCGGGGTGATCGATTATGTCGGCCGGGTGGTTGTGCGGCTGGCGAATGCGGGGTCTCCAGCCATTGCAGTCATCGTCAT
GATGGCGGCGGTCATTTTCCTCTCCGCCTTCATCAACAACACGCCTGTGGTGATCATTCTCATCCCCGTGGCGATCCGCC
TGGCCAAGGCGATCAATGTGGCCCCGTCCAAACTGCTGATGCCGCTGTCCTTTGCGGCGATATTCGGCGGCACGACCACC
CTGATCGGAACCTCGACGAACATCCTCGTGGACGGCGTTGCCCAGAAGCAGGGCATGGCGGCGTTCGGCATGTTCGAGAT
CACGATGGCGGGCCTCATCTTTGCCGGGGTCGGCGTGCTGTATACCTCGATCCTCGGACCCTTCCTGCTGCCCAAGCGCG
AGACGCTCGCGGCGATGCTGCCCGACCATAAGGAGCGGCGGTTCATCGCGCAGATCCTGATCCCCCTGAATTCGGACCTG
ATCGGGAAAACCATCGCGGAGACCGGCTTCACGGCGGAGAAGGGGTTCACGGTCATCGACGTGTTCCGCGAGGGTGTTTC
GCTGCGGGCCGATCTGAAAAAGATCGTGCTGCAGGCGGGCGACCGGATCGTGCTGCGTTCGCCGGTGGCGGAGATGCTGA
CGCTGAAAGAAGCGGGCAGCATCGCCATCGGGACGCGCGGGGGCGATCAGGCGTCGTTCGAGCCGGTGCAGACGACCGAG
ACGGTCATCATGGAGGGCGTGATCGGGCCGCATTCGCGTCTGATCGGGCGCCGCCTGGCGGGGCTGGGCCTGGCGCGCCT
CTATGGCGTCTACGTTCTGGCCATTCACCGGCGCGGCGAGAACATGGCGACGCAGATGAACGAGCTGCGCTTTGAGGTCG
GCGATACGGTGCTGCTGGAAGGCCCGCCGCGCGGCATGCGCGAGATGTTTGACGAGGGGCTGCTGAACAACCTCACCGAA
AGTTCTGACCGCGCGATCCGCCGCGACAAGGCGCCGGTCGCCATTGCGGCGGTGCTGATGGTGATGGGACTGGCGGCGAT
CGAGCTGATGCCGATTGCCGGGCTGGCGCTGATCGCGGCGACGGCTGTGGTGGCTTTTGGGTGCCTTGACCATCAGGAAG
CCTACCGGTCGATCCAGTGGGACATCCTGATGCTTATTTTCGGCATGCTGGCGCTGGGAACGGCCATGGAGAAGACAGGA
GCGGGCGAAGTGGTCGTCGGGCTGCTGTCACAGGTCTCGGGCGGGTTTGGGCCGCTGGTGCTGCTGGTGATCGTGTATGC
GTTTACGTCCGTCATCACGGAGATCATGAGCAACAATGCGGCCGCTATCCTCATCACGCCGCTGGCCATTGGCCTGGCCA
ACCAGGCGGGGATCGATCCCAGACCGTTCGTTGTGGCGGTGATGTTTGCGGCCAGCGCGAGCTTTGCGACGCCTATCGGG
TATCAGACCAACACGCTGGTTTACCGGGCGGGCGGCTACAAGTTCATGGACTTCGTGAAGTTTGGTTCGCCGCTCAACTG
GATATTTGTCGGGGTCGCGGCAGTGGTGATTCCGATTTTCTGGCCGCTGGTTCCGGTCGCTCAATAG

Upstream 100 bases:

>100_bases
ATCTCAACAGTCCTGTCATAATTGCAAACGTGTAAGGCGGTTGCGCTTTGGCGCAGTTCCGGCTTGTCTGCGGGCAATTG
CAACAGCCCCGGTCCAAAGC

Downstream 100 bases:

>100_bases
GGCAAAAGCCGGTGCTTTGTGCAGTCAATGCAGCGTTTGCATGAATATTGGGCAGCTTTGGCTGCAAACAAACGCCCAAG
AGAAGGGCGTTGAGTGCTAG

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MLAPILESSVFQISFVLILVGFVFFGFIREKMPADVVALLAMGALMLTGILSVNETIGVFSNSAPITVAAMFILSAALER
TGVIDYVGRVVVRLANAGSPAIAVIVMMAAVIFLSAFINNTPVVIILIPVAIRLAKAINVAPSKLLMPLSFAAIFGGTTT
LIGTSTNILVDGVAQKQGMAAFGMFEITMAGLIFAGVGVLYTSILGPFLLPKRETLAAMLPDHKERRFIAQILIPLNSDL
IGKTIAETGFTAEKGFTVIDVFREGVSLRADLKKIVLQAGDRIVLRSPVAEMLTLKEAGSIAIGTRGGDQASFEPVQTTE
TVIMEGVIGPHSRLIGRRLAGLGLARLYGVYVLAIHRRGENMATQMNELRFEVGDTVLLEGPPRGMREMFDEGLLNNLTE
SSDRAIRRDKAPVAIAAVLMVMGLAAIELMPIAGLALIAATAVVAFGCLDHQEAYRSIQWDILMLIFGMLALGTAMEKTG
AGEVVVGLLSQVSGGFGPLVLLVIVYAFTSVITEIMSNNAAAILITPLAIGLANQAGIDPRPFVVAVMFAASASFATPIG
YQTNTLVYRAGGYKFMDFVKFGSPLNWIFVGVAAVVIPIFWPLVPVAQ

Sequences:

>Translated_608_residues
MLAPILESSVFQISFVLILVGFVFFGFIREKMPADVVALLAMGALMLTGILSVNETIGVFSNSAPITVAAMFILSAALER
TGVIDYVGRVVVRLANAGSPAIAVIVMMAAVIFLSAFINNTPVVIILIPVAIRLAKAINVAPSKLLMPLSFAAIFGGTTT
LIGTSTNILVDGVAQKQGMAAFGMFEITMAGLIFAGVGVLYTSILGPFLLPKRETLAAMLPDHKERRFIAQILIPLNSDL
IGKTIAETGFTAEKGFTVIDVFREGVSLRADLKKIVLQAGDRIVLRSPVAEMLTLKEAGSIAIGTRGGDQASFEPVQTTE
TVIMEGVIGPHSRLIGRRLAGLGLARLYGVYVLAIHRRGENMATQMNELRFEVGDTVLLEGPPRGMREMFDEGLLNNLTE
SSDRAIRRDKAPVAIAAVLMVMGLAAIELMPIAGLALIAATAVVAFGCLDHQEAYRSIQWDILMLIFGMLALGTAMEKTG
AGEVVVGLLSQVSGGFGPLVLLVIVYAFTSVITEIMSNNAAAILITPLAIGLANQAGIDPRPFVVAVMFAASASFATPIG
YQTNTLVYRAGGYKFMDFVKFGSPLNWIFVGVAAVVIPIFWPLVPVAQ
>Mature_608_residues
MLAPILESSVFQISFVLILVGFVFFGFIREKMPADVVALLAMGALMLTGILSVNETIGVFSNSAPITVAAMFILSAALER
TGVIDYVGRVVVRLANAGSPAIAVIVMMAAVIFLSAFINNTPVVIILIPVAIRLAKAINVAPSKLLMPLSFAAIFGGTTT
LIGTSTNILVDGVAQKQGMAAFGMFEITMAGLIFAGVGVLYTSILGPFLLPKRETLAAMLPDHKERRFIAQILIPLNSDL
IGKTIAETGFTAEKGFTVIDVFREGVSLRADLKKIVLQAGDRIVLRSPVAEMLTLKEAGSIAIGTRGGDQASFEPVQTTE
TVIMEGVIGPHSRLIGRRLAGLGLARLYGVYVLAIHRRGENMATQMNELRFEVGDTVLLEGPPRGMREMFDEGLLNNLTE
SSDRAIRRDKAPVAIAAVLMVMGLAAIELMPIAGLALIAATAVVAFGCLDHQEAYRSIQWDILMLIFGMLALGTAMEKTG
AGEVVVGLLSQVSGGFGPLVLLVIVYAFTSVITEIMSNNAAAILITPLAIGLANQAGIDPRPFVVAVMFAASASFATPIG
YQTNTLVYRAGGYKFMDFVKFGSPLNWIFVGVAAVVIPIFWPLVPVAQ

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=614, Percent_Identity=32.0846905537459, Blast_Score=241, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64547; Mature: 64547

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPILESSVFQISFVLILVGFVFFGFIREKMPADVVALLAMGALMLTGILSVNETIGVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCC
SNSAPITVAAMFILSAALERTGVIDYVGRVVVRLANAGSPAIAVIVMMAAVIFLSAFINN
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
TPVVIILIPVAIRLAKAINVAPSKLLMPLSFAAIFGGTTTLIGTSTNILVDGVAQKQGMA
CCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEECHHHHCCCH
AFGMFEITMAGLIFAGVGVLYTSILGPFLLPKRETLAAMLPDHKERRFIAQILIPLNSDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCH
IGKTIAETGFTAEKGFTVIDVFREGVSLRADLKKIVLQAGDRIVLRSPVAEMLTLKEAGS
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
IAIGTRGGDQASFEPVQTTETVIMEGVIGPHSRLIGRRLAGLGLARLYGVYVLAIHRRGE
EEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NMATQMNELRFEVGDTVLLEGPPRGMREMFDEGLLNNLTESSDRAIRRDKAPVAIAAVLM
HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
VMGLAAIELMPIAGLALIAATAVVAFGCLDHQEAYRSIQWDILMLIFGMLALGTAMEKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGEVVVGLLSQVSGGFGPLVLLVIVYAFTSVITEIMSNNAAAILITPLAIGLANQAGIDP
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCC
RPFVVAVMFAASASFATPIGYQTNTLVYRAGGYKFMDFVKFGSPLNWIFVGVAAVVIPIF
CHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
WPLVPVAQ
HHHCCCCC
>Mature Secondary Structure
MLAPILESSVFQISFVLILVGFVFFGFIREKMPADVVALLAMGALMLTGILSVNETIGVF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCC
SNSAPITVAAMFILSAALERTGVIDYVGRVVVRLANAGSPAIAVIVMMAAVIFLSAFINN
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
TPVVIILIPVAIRLAKAINVAPSKLLMPLSFAAIFGGTTTLIGTSTNILVDGVAQKQGMA
CCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEECHHHHCCCH
AFGMFEITMAGLIFAGVGVLYTSILGPFLLPKRETLAAMLPDHKERRFIAQILIPLNSDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCH
IGKTIAETGFTAEKGFTVIDVFREGVSLRADLKKIVLQAGDRIVLRSPVAEMLTLKEAGS
HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCC
IAIGTRGGDQASFEPVQTTETVIMEGVIGPHSRLIGRRLAGLGLARLYGVYVLAIHRRGE
EEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NMATQMNELRFEVGDTVLLEGPPRGMREMFDEGLLNNLTESSDRAIRRDKAPVAIAAVLM
HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
VMGLAAIELMPIAGLALIAATAVVAFGCLDHQEAYRSIQWDILMLIFGMLALGTAMEKTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGEVVVGLLSQVSGGFGPLVLLVIVYAFTSVITEIMSNNAAAILITPLAIGLANQAGIDP
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCC
RPFVVAVMFAASASFATPIGYQTNTLVYRAGGYKFMDFVKFGSPLNWIFVGVAAVVIPIF
CHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
WPLVPVAQ
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]