| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800123
Identifier: 114800123
GI number: 114800123
Start: 2614010
End: 2615599
Strand: Reverse
Name: 114800123
Synonym: HNE_2486
Alternate gene names: NA
Gene position: 2615599-2614010 (Counterclockwise)
Preceding gene: 114798311
Following gene: 114798434
Centisome position: 70.6
GC content: 61.07
Gene sequence:
>1590_bases ATGACCGAAACAAAGCCGGCCTTTTCCCTCGCGTCTTTGTCGGGAAGCCAGCATGCCTTTCCAACAGGCGGCGCCTCCCT CATCGTATTCGTCAAGGAAGACTGCGAGACCTGCAACACCGCAGCGCCTGTGGTGGAGGCGCTTCACAAGGCGTATGGCG ACAAAATTCAGGTGCTGATGCCGGCCCAGTCTGGCGAGGACAATGCGGTCTTCAGCGCGCGGCATAGCCTGACCTTTCCT GTCCTCGACGACACAAGCTGTCAGGCTTCGTTCGACTGGGACATCGAGATTGTGCCCTCTGTATTCTGGATGGACGCAGA TGGCACCGTAAGAGAGCATTTCGAAGGGTTCGTGCGGCCGGAATGGGAAAAGCTCAACGCAGACCTTTCGGCGAGCCTCG GCCTGCCGGTGGCGCACATCGACTGGGCGAGCCTGCCCCCCTGGCGCCCCGGATGCGGATCGCGGCACCTTTATCCGGAA GTCCATGACAAGCTGCGCGCCGCTGCCGATGGTCAGTCCCTCCTGGCCCGCCGTATCGAGATTGCCGAAGCCGATGATGT GATCGAATTCATGTTCGATCAGGGCTTTTCCGATGGCTTGCCGCTGGTGCCGCCGACACCCGAACGCGTCCTGAAAATGT TGTCGGGCACCCACCGCGCGCCGCAGGACGTGATTGCGGTTGTTCCGCCGAACATGGGAGAGGCGACGACAGAAAAGATC GCCATCAATGCGGTGATGGCCGGCTGCAAACCGGAATACATGCCGGTTCTTATTGCAGCCCTGGAAGCGGTGTGTACGGA CGAGTTCAATATCCACGGCGTGACAGCGACGACGATGGGGGCGGCGCCGGTGATTGTCGTCAATGGGCCAATCCGCGACA GGATCGGCATGAACAAGGGCCTCGGCGCGCTCGGTTCGGGCAATCGCGCCAATGCCACAATCGGGCGGGCGCTGCGCCTG ATCGTCGGCAATGTCGGCGGCGGAAAACCAGGCGGGGTGGAGCGCTCCACGCTTGGTAACCCGATGAAATACACGATGTG CTTTGCCGAGAACGAGGAACGTTCTCCCTGGCCGCCGCTGCATGTCGAGCGTGGGTTCAACAAGGAAGATTCGGTCGTAA CGGTCTTTGCGATGACGGGCGGGCCGGTTCACATCGTCGACCAGGAATCGCGGGCGCCTCAGGAGGTTGCGGGCTCGATC GGCCTCGGGCTGGAAGGGGTGTTTCTGCCAAAGCTGAGGAACATGCCCATCGACGCGCTGCTCGTCGTTTGCCCGGAGCA TATCGATACGCTGATGAGTGAGGGCCCCTACACCAAGGCGCAGCTGCGCGCGCGTATTCAGGAAGTCACGATGCGGCCGC TGAGCGAAATGGTTGCAAGCGATACATCCGGAGCCGGTATCTCCAGAGCGACTGCCGTGAAAATGGGGGCCGAGAAGCTC AAAACCCCTGCGCCGAAATTTGCAGGGAAGGAATATATCCACATCGTTGTGGCCGGTTCAGACGCTGGCAAGTTCAGCTC CGCCTTTCATGGCTGGGCGACGGGGGAAATCGGGTCTCAGTCGGTCTCGCGCAAGATCGATTTGGGGTAG
Upstream 100 bases:
>100_bases GGTGGGTTCGATTCCCATCCACCTCCGCCAGCGGGCGCTGCTCTGGACAAATGCGGCTATGGGCCACCAATAGGCCGCCA AAAGACGAAGGAGAAACTCA
Downstream 100 bases:
>100_bases AGCGGGAGGCGCGAACATGTATGATTGTACCGACGTTCGCAGAAGAAGGGTGAAAGATGACAATAATTCTCGATCCGACC GATGAGCGAAAGCCCGTCTC
Product: thiol-disulfide oxidoreductase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTETKPAFSLASLSGSQHAFPTGGASLIVFVKEDCETCNTAAPVVEALHKAYGDKIQVLMPAQSGEDNAVFSARHSLTFP VLDDTSCQASFDWDIEIVPSVFWMDADGTVREHFEGFVRPEWEKLNADLSASLGLPVAHIDWASLPPWRPGCGSRHLYPE VHDKLRAAADGQSLLARRIEIAEADDVIEFMFDQGFSDGLPLVPPTPERVLKMLSGTHRAPQDVIAVVPPNMGEATTEKI AINAVMAGCKPEYMPVLIAALEAVCTDEFNIHGVTATTMGAAPVIVVNGPIRDRIGMNKGLGALGSGNRANATIGRALRL IVGNVGGGKPGGVERSTLGNPMKYTMCFAENEERSPWPPLHVERGFNKEDSVVTVFAMTGGPVHIVDQESRAPQEVAGSI GLGLEGVFLPKLRNMPIDALLVVCPEHIDTLMSEGPYTKAQLRARIQEVTMRPLSEMVASDTSGAGISRATAVKMGAEKL KTPAPKFAGKEYIHIVVAGSDAGKFSSAFHGWATGEIGSQSVSRKIDLG
Sequences:
>Translated_529_residues MTETKPAFSLASLSGSQHAFPTGGASLIVFVKEDCETCNTAAPVVEALHKAYGDKIQVLMPAQSGEDNAVFSARHSLTFP VLDDTSCQASFDWDIEIVPSVFWMDADGTVREHFEGFVRPEWEKLNADLSASLGLPVAHIDWASLPPWRPGCGSRHLYPE VHDKLRAAADGQSLLARRIEIAEADDVIEFMFDQGFSDGLPLVPPTPERVLKMLSGTHRAPQDVIAVVPPNMGEATTEKI AINAVMAGCKPEYMPVLIAALEAVCTDEFNIHGVTATTMGAAPVIVVNGPIRDRIGMNKGLGALGSGNRANATIGRALRL IVGNVGGGKPGGVERSTLGNPMKYTMCFAENEERSPWPPLHVERGFNKEDSVVTVFAMTGGPVHIVDQESRAPQEVAGSI GLGLEGVFLPKLRNMPIDALLVVCPEHIDTLMSEGPYTKAQLRARIQEVTMRPLSEMVASDTSGAGISRATAVKMGAEKL KTPAPKFAGKEYIHIVVAGSDAGKFSSAFHGWATGEIGSQSVSRKIDLG >Mature_528_residues TETKPAFSLASLSGSQHAFPTGGASLIVFVKEDCETCNTAAPVVEALHKAYGDKIQVLMPAQSGEDNAVFSARHSLTFPV LDDTSCQASFDWDIEIVPSVFWMDADGTVREHFEGFVRPEWEKLNADLSASLGLPVAHIDWASLPPWRPGCGSRHLYPEV HDKLRAAADGQSLLARRIEIAEADDVIEFMFDQGFSDGLPLVPPTPERVLKMLSGTHRAPQDVIAVVPPNMGEATTEKIA INAVMAGCKPEYMPVLIAALEAVCTDEFNIHGVTATTMGAAPVIVVNGPIRDRIGMNKGLGALGSGNRANATIGRALRLI VGNVGGGKPGGVERSTLGNPMKYTMCFAENEERSPWPPLHVERGFNKEDSVVTVFAMTGGPVHIVDQESRAPQEVAGSIG LGLEGVFLPKLRNMPIDALLVVCPEHIDTLMSEGPYTKAQLRARIQEVTMRPLSEMVASDTSGAGISRATAVKMGAEKLK TPAPKFAGKEYIHIVVAGSDAGKFSSAFHGWATGEIGSQSVSRKIDLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56499; Mature: 56368
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETKPAFSLASLSGSQHAFPTGGASLIVFVKEDCETCNTAAPVVEALHKAYGDKIQVLM CCCCCCCEEHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEE PAQSGEDNAVFSARHSLTFPVLDDTSCQASFDWDIEIVPSVFWMDADGTVREHFEGFVRP ECCCCCCCCEEEECCCEEEEEECCCCCCEECCCCEEEECEEEEECCCCHHHHHHCCCCCC EWEKLNADLSASLGLPVAHIDWASLPPWRPGCGSRHLYPEVHDKLRAAADGQSLLARRIE CHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH IAEADDVIEFMFDQGFSDGLPLVPPTPERVLKMLSGTHRAPQDVIAVVPPNMGEATTEKI HHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHE AINAVMAGCKPEYMPVLIAALEAVCTDEFNIHGVTATTMGAAPVIVVNGPIRDRIGMNKG EEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHCCCCCC LGALGSGNRANATIGRALRLIVGNVGGGKPGGVERSTLGNPMKYTMCFAENEERSPWPPL CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCC HVERGFNKEDSVVTVFAMTGGPVHIVDQESRAPQEVAGSIGLGLEGVFLPKLRNMPIDAL HHCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCEEECHHHCCCCHHHH LVVCPEHIDTLMSEGPYTKAQLRARIQEVTMRPLSEMVASDTSGAGISRATAVKMGAEKL EEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHH KTPAPKFAGKEYIHIVVAGSDAGKFSSAFHGWATGEIGSQSVSRKIDLG CCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure TETKPAFSLASLSGSQHAFPTGGASLIVFVKEDCETCNTAAPVVEALHKAYGDKIQVLM CCCCCCEEHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEE PAQSGEDNAVFSARHSLTFPVLDDTSCQASFDWDIEIVPSVFWMDADGTVREHFEGFVRP ECCCCCCCCEEEECCCEEEEEECCCCCCEECCCCEEEECEEEEECCCCHHHHHHCCCCCC EWEKLNADLSASLGLPVAHIDWASLPPWRPGCGSRHLYPEVHDKLRAAADGQSLLARRIE CHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH IAEADDVIEFMFDQGFSDGLPLVPPTPERVLKMLSGTHRAPQDVIAVVPPNMGEATTEKI HHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHE AINAVMAGCKPEYMPVLIAALEAVCTDEFNIHGVTATTMGAAPVIVVNGPIRDRIGMNKG EEEHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCHHHHCCCCCC LGALGSGNRANATIGRALRLIVGNVGGGKPGGVERSTLGNPMKYTMCFAENEERSPWPPL CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCCC HVERGFNKEDSVVTVFAMTGGPVHIVDQESRAPQEVAGSIGLGLEGVFLPKLRNMPIDAL HHCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCEEECHHHCCCCHHHH LVVCPEHIDTLMSEGPYTKAQLRARIQEVTMRPLSEMVASDTSGAGISRATAVKMGAEKL EEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHH KTPAPKFAGKEYIHIVVAGSDAGKFSSAFHGWATGEIGSQSVSRKIDLG CCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA