Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114800112

Identifier: 114800112

GI number: 114800112

Start: 3468055

End: 3468444

Strand: Direct

Name: 114800112

Synonym: HNE_3314

Alternate gene names: NA

Gene position: 3468055-3468444 (Clockwise)

Preceding gene: 114797623

Following gene: 114799647

Centisome position: 93.6

GC content: 56.15

Gene sequence:

>390_bases
TTGAATCCCGTTGATATTTCAATTCTCGTGGGTATGGCACTTGCTTCGCATATTCTCTCAACGCTCATTATCCGCCTCGG
CATTCCGAAGCTCAAATCGGGCGATGCGCCTGCGACCGGGGACGGCGCCCTGCCCGAAAGCACAAAAGGCCGCGTCTTCG
ATCTGGGATCAACCGGCTTCTGGATTGGCCTTTGCGAAACGCTCCTGATCTTCATTCTGGTCAGCGCGCAGCAGTTCAGC
GCGCTCGCAATCATCATCGGCGTCAAACAATTCGTCCGCAGCGACAAGATCCAGCAGAACCCGTCCTACTACCTGCTGGG
AACCCTCTGTAACCTGACGATCGCAACGCTGTTTGCCCTGACGGCTAACCAGCTCACCGCACTCTACTGA

Upstream 100 bases:

>100_bases
CGCCGGGCGGAGATAGATCTTGTGATCGAAGCGGAGCGACAGATACTGGAACAGCTTAAAACCTACACCCAACCGAATAC
CATTGCTTCGGAGAAATCAA

Downstream 100 bases:

>100_bases
TCAGCCGATCGCCGCCCGCTGCGCCGCAAACAGCTCGTTGCAGCCCTTCTCGGCCAGTCGCATCATCTCGTCGAGCTCTG
TCCGGCTCATCGGCCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNPVDISILVGMALASHILSTLIIRLGIPKLKSGDAPATGDGALPESTKGRVFDLGSTGFWIGLCETLLIFILVSAQQFS
ALAIIIGVKQFVRSDKIQQNPSYYLLGTLCNLTIATLFALTANQLTALY

Sequences:

>Translated_129_residues
MNPVDISILVGMALASHILSTLIIRLGIPKLKSGDAPATGDGALPESTKGRVFDLGSTGFWIGLCETLLIFILVSAQQFS
ALAIIIGVKQFVRSDKIQQNPSYYLLGTLCNLTIATLFALTANQLTALY
>Mature_129_residues
MNPVDISILVGMALASHILSTLIIRLGIPKLKSGDAPATGDGALPESTKGRVFDLGSTGFWIGLCETLLIFILVSAQQFS
ALAIIIGVKQFVRSDKIQQNPSYYLLGTLCNLTIATLFALTANQLTALY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13754; Mature: 13754

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVDISILVGMALASHILSTLIIRLGIPKLKSGDAPATGDGALPESTKGRVFDLGSTGF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCH
WIGLCETLLIFILVSAQQFSALAIIIGVKQFVRSDKIQQNPSYYLLGTLCNLTIATLFAL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
TANQLTALY
HHHHHHHCC
>Mature Secondary Structure
MNPVDISILVGMALASHILSTLIIRLGIPKLKSGDAPATGDGALPESTKGRVFDLGSTGF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCH
WIGLCETLLIFILVSAQQFSALAIIIGVKQFVRSDKIQQNPSYYLLGTLCNLTIATLFAL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
TANQLTALY
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA