| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fhs
Identifier: 114799647
GI number: 114799647
Start: 3469261
End: 3470931
Strand: Direct
Name: fhs
Synonym: HNE_3316
Alternate gene names: 114799647
Gene position: 3469261-3470931 (Clockwise)
Preceding gene: 114800112
Following gene: 114800305
Centisome position: 93.64
GC content: 64.33
Gene sequence:
>1671_bases ATGGCCAGTGACATCGAGATTGCGCGGGGCGCAAAGAAAAAGCCGATCCAGGAGGTCGCCGCCAGGGCGGGCGTGAGCCC TGAAAACCTGATCCCCTACGGCCACGACAAGGCCAAGATCTCGGCCGCCCATCTGGCTGGCCTCGCCCACAATGCCACCG GCAAGCTGATCCTCGTCACCGCCATCAACCCGACCCCTGCGGGCGAAGGCAAGACCACCACCTCTATCGGCCTCGCCGAC GCTATGAACCGCATCGGCGCAAACACCCTCCTCTGCCTGCGCGAGCCTTCGCTGGGCCCCTGCTTCGGCATGAAGGGCGG CGCTACAGGCGGCGGCCTTGCCCAGATCGTGCCGATGGAAGACATCAACCTGCATTTCACCGGCGACTTCCACGCCATCA CCTCGGCGCACAATCTCCTCTCCACCATGATCGACAATCACATCCATTGGGGCGGCGAGCCAAAGCTTGAAGCCGTGCGC ACCAGCTGGCGCCGCGTGATGGACATGAACGACCGTAGCCTGAGGAATATTGTTTCCGGCCTCGGCGGCCCCGGCAATGG CAGCCCTTCGGAGACCGGCTTTGACATCACCGTCGCCTCCGAAGTCATGGCCATTCTCTGCCTCGCCACGGACGCTGAAG ATCTCGAGGCCCGCCTCGCCCGCATCATCGTCGGCTACACAAGCGAGAAGGAAGCCGTCACCGCCGCAGACATCAAGGCC ACCGGCGCAATGATGGCCCTGCTGCGCGATGCCATGCTGCCAAACCTTGTACAGACGCTGGAAAACAATCCCTGCCTGGT GCATGGCGGCCCCTTCGCCAACATCGCCCATGGCTGCAACTCGGTCATGGCCACAAGCGCGGCCCTGAAGATGGCAGACT ATGTCGTCACCGAAGCAGGTTTTGGCGCAGACCTTGGCGCCGAGAAATTCCTCAACATCAAATGCCGCCAGGCCGGCCTT GCGCCCGACGCCGTCGTTCTGGTCGCAACCATCCGGGCCCTGAAGATGCATGGCGGCCTCGGCAAGAATGATCTGGGCAA GGTCAGCTATGAGGCGCTGGAAAGCGGCCTTGAAAATCTCGGGCGCCATATCGGGAACCTGCGCAGCTTCGGCCTGCCGG TCATCGTCGCCATCAACCGCTTCACCACCGACACCGAAGGTGAAGTCCACGCCCTTCAGGCCTATTGCGAAAAGCTCGGC GTGCCCGTCTCCCTCTGCACCCATTGGGCAGAAGGGGGCAAAGGCACCGAAGACCTCGCCCGCGGCGTCACCGCGCTCAT CGAAAAGGGAGAGGCAGACTTCAAACCCCTTTATCCCGATGACATGCCGCTGCTGGAAAAGATCGAGACGGTCGCCAAGT CGATCTACCGGGCCGGAAGGGTGGAAACCACCCGCGCCGTCCGCAACCAGCTCGCCGCCTGGGAGAAGGCGGGCTTCGGC CACCTGCCCGTCTGCATGGCCAAGACCCAGTACAGCTTCTCCACCGATCCGGCCCTGCTGGGCGCGCCCGAAGGCCATGT CGTGCGCCTGCGCGAAGTACGCCTCGCGGCCGGGGCCGGCTTCGTGGTCGCCATCTGCGGCGACATCATGACGATGCCCG GCCTCCCCCGCCGCCCCGCCGCCGAGCACATCCACCTCAACCGCCAGGGCCAGATCGAGGGGTTGAACTAG
Upstream 100 bases:
>100_bases GATTTGGCATCCGGGGGAATCCTTCTAGCTGAAGGCCTGATTTGCGGGTTTTGCGGCGCCTGTCTACACCAAGGCTGCGC GCGAAAGGAAAGTACCGAAT
Downstream 100 bases:
>100_bases CCCATGCCTATTGTGCCGGGGATGTACCGCCCTTAATCCAGTAACATGGCGGACAATTCAGAAATCCTGAGCCTGATGCA GCGCCTCGACCAGCGCTCCC
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MASDIEIARGAKKKPIQEVAARAGVSPENLIPYGHDKAKISAAHLAGLAHNATGKLILVTAINPTPAGEGKTTTSIGLAD AMNRIGANTLLCLREPSLGPCFGMKGGATGGGLAQIVPMEDINLHFTGDFHAITSAHNLLSTMIDNHIHWGGEPKLEAVR TSWRRVMDMNDRSLRNIVSGLGGPGNGSPSETGFDITVASEVMAILCLATDAEDLEARLARIIVGYTSEKEAVTAADIKA TGAMMALLRDAMLPNLVQTLENNPCLVHGGPFANIAHGCNSVMATSAALKMADYVVTEAGFGADLGAEKFLNIKCRQAGL APDAVVLVATIRALKMHGGLGKNDLGKVSYEALESGLENLGRHIGNLRSFGLPVIVAINRFTTDTEGEVHALQAYCEKLG VPVSLCTHWAEGGKGTEDLARGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFG HLPVCMAKTQYSFSTDPALLGAPEGHVVRLREVRLAAGAGFVVAICGDIMTMPGLPRRPAAEHIHLNRQGQIEGLN
Sequences:
>Translated_556_residues MASDIEIARGAKKKPIQEVAARAGVSPENLIPYGHDKAKISAAHLAGLAHNATGKLILVTAINPTPAGEGKTTTSIGLAD AMNRIGANTLLCLREPSLGPCFGMKGGATGGGLAQIVPMEDINLHFTGDFHAITSAHNLLSTMIDNHIHWGGEPKLEAVR TSWRRVMDMNDRSLRNIVSGLGGPGNGSPSETGFDITVASEVMAILCLATDAEDLEARLARIIVGYTSEKEAVTAADIKA TGAMMALLRDAMLPNLVQTLENNPCLVHGGPFANIAHGCNSVMATSAALKMADYVVTEAGFGADLGAEKFLNIKCRQAGL APDAVVLVATIRALKMHGGLGKNDLGKVSYEALESGLENLGRHIGNLRSFGLPVIVAINRFTTDTEGEVHALQAYCEKLG VPVSLCTHWAEGGKGTEDLARGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFG HLPVCMAKTQYSFSTDPALLGAPEGHVVRLREVRLAAGAGFVVAICGDIMTMPGLPRRPAAEHIHLNRQGQIEGLN >Mature_555_residues ASDIEIARGAKKKPIQEVAARAGVSPENLIPYGHDKAKISAAHLAGLAHNATGKLILVTAINPTPAGEGKTTTSIGLADA MNRIGANTLLCLREPSLGPCFGMKGGATGGGLAQIVPMEDINLHFTGDFHAITSAHNLLSTMIDNHIHWGGEPKLEAVRT SWRRVMDMNDRSLRNIVSGLGGPGNGSPSETGFDITVASEVMAILCLATDAEDLEARLARIIVGYTSEKEAVTAADIKAT GAMMALLRDAMLPNLVQTLENNPCLVHGGPFANIAHGCNSVMATSAALKMADYVVTEAGFGADLGAEKFLNIKCRQAGLA PDAVVLVATIRALKMHGGLGKNDLGKVSYEALESGLENLGRHIGNLRSFGLPVIVAINRFTTDTEGEVHALQAYCEKLGV PVSLCTHWAEGGKGTEDLARGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFGH LPVCMAKTQYSFSTDPALLGAPEGHVVRLREVRLAAGAGFVVAICGDIMTMPGLPRRPAAEHIHLNRQGQIEGLN
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=41.5458937198068, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI36796743, Length=621, Percent_Identity=41.5458937198068, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI310124614, Length=105, Percent_Identity=31.4285714285714, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17568737, Length=617, Percent_Identity=41.0048622366288, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17568739, Length=617, Percent_Identity=41.0048622366288, Blast_Score=427, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6319558, Length=632, Percent_Identity=39.2405063291139, Blast_Score=419, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6321643, Length=627, Percent_Identity=39.5534290271132, Blast_Score=414, Evalue=1e-116, Organism=Drosophila melanogaster, GI24645718, Length=623, Percent_Identity=42.215088282504, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI17137370, Length=623, Percent_Identity=42.215088282504, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI62472483, Length=623, Percent_Identity=42.215088282504, Blast_Score=437, Evalue=1e-123, Organism=Drosophila melanogaster, GI45551871, Length=623, Percent_Identity=42.215088282504, Blast_Score=437, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_HYPNA (Q0BX04)
Other databases:
- EMBL: CP000158 - RefSeq: YP_761989.1 - ProteinModelPortal: Q0BX04 - SMR: Q0BX04 - STRING: Q0BX04 - GeneID: 4290287 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_3316 - NMPDR: fig|228405.5.peg.3176 - TIGR: HNE_3316 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: EIMAVLC - PhylomeDB: Q0BX04 - BioCyc: HNEP81032:HNE_3316-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 58754; Mature: 58623
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDIEIARGAKKKPIQEVAARAGVSPENLIPYGHDKAKISAAHLAGLAHNATGKLILVT CCCCCCHHCCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE AINPTPAGEGKTTTSIGLADAMNRIGANTLLCLREPSLGPCFGMKGGATGGGLAQIVPME EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC DINLHFTGDFHAITSAHNLLSTMIDNHIHWGGEPKLEAVRTSWRRVMDMNDRSLRNIVSG CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LGGPGNGSPSETGFDITVASEVMAILCLATDAEDLEARLARIIVGYTSEKEAVTAADIKA CCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHH TGAMMALLRDAMLPNLVQTLENNPCLVHGGPFANIAHGCNSVMATSAALKMADYVVTEAG HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGADLGAEKFLNIKCRQAGLAPDAVVLVATIRALKMHGGLGKNDLGKVSYEALESGLENL CCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GRHIGNLRSFGLPVIVAINRFTTDTEGEVHALQAYCEKLGVPVSLCTHWAEGGKGTEDLA HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH RGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC HLPVCMAKTQYSFSTDPALLGAPEGHVVRLREVRLAAGAGFVVAICGDIMTMPGLPRRPA CCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCC AEHIHLNRQGQIEGLN HHHEECCCCCCCCCCC >Mature Secondary Structure ASDIEIARGAKKKPIQEVAARAGVSPENLIPYGHDKAKISAAHLAGLAHNATGKLILVT CCCCCHHCCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE AINPTPAGEGKTTTSIGLADAMNRIGANTLLCLREPSLGPCFGMKGGATGGGLAQIVPME EECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC DINLHFTGDFHAITSAHNLLSTMIDNHIHWGGEPKLEAVRTSWRRVMDMNDRSLRNIVSG CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LGGPGNGSPSETGFDITVASEVMAILCLATDAEDLEARLARIIVGYTSEKEAVTAADIKA CCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHH TGAMMALLRDAMLPNLVQTLENNPCLVHGGPFANIAHGCNSVMATSAALKMADYVVTEAG HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FGADLGAEKFLNIKCRQAGLAPDAVVLVATIRALKMHGGLGKNDLGKVSYEALESGLENL CCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GRHIGNLRSFGLPVIVAINRFTTDTEGEVHALQAYCEKLGVPVSLCTHWAEGGKGTEDLA HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH RGVTALIEKGEADFKPLYPDDMPLLEKIETVAKSIYRAGRVETTRAVRNQLAAWEKAGFG HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC HLPVCMAKTQYSFSTDPALLGAPEGHVVRLREVRLAAGAGFVVAICGDIMTMPGLPRRPA CCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCC AEHIHLNRQGQIEGLN HHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA