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The map label for this gene is 114800095

Identifier: 114800095

GI number: 114800095

Start: 1256830

End: 1258269

Strand: Reverse

Name: 114800095

Synonym: HNE_1237

Alternate gene names: NA

Gene position: 1258269-1256830 (Counterclockwise)

Preceding gene: 114797909

Following gene: 114799357

Centisome position: 33.96

GC content: 59.86

Gene sequence:

>1440_bases
ATGGCGGAACGCAAGGAAAAAACCCTTATCGGCCCGCGTGTTCGGCGGCTGCGGCGCACCCTCGGCATCACCCAGGCGCA
GATGGCGGAGGACCTTGGCGTCTCGGCCAGCTACATCAACCTGATCGAGGCCAACCAGCGCCCGATCAGCGCCAACCTCC
TGTTAACCCTGGCGCGAGTTTACGACTTTGACATTTCGGATGTGGGCGGCGCGGGGGATGCGCGGCTTGTTTCTGAACTG
ATGGAAGTGGTGCGCGACCCTGTTCTGGAAGCCGGGCCGGTCGGCAAGAATGATGTGGAGGACATGGTGAATGCCAGTCC
CGACATCGCGCGGGCGTTTGTGCAGCTTTACGACAAGTATCGCGAGCTCGCCCTGCGGACCTATTCGGACAACAATCCGT
TGACGGACCGCGAGAAAGTGGAGCTGCTGGAAGAATCCGCCCGCAGCGTGGAGTCCGTGCGGCAGATGTTGCAGGATCAC
CGGAATTATTTCCCCGAGCTTGACGAAGCGGCCGAAGCCTTCGGCGCAGAGCTCTCGACGCTGCATGAAGATCCGTATGC
GGCGATGATCCAGCGGCTCAAAGGTCAGCATGGGCTGCGCGTGCGGGTCGTTCCCTATGACATCATGCCCAACACGCTGC
GCTATTATGACCGGCACAAGCGGGGGATCGATCTGTCGGAACTGTTGCCGCAGTCGGGCCGCCGGTTTCAGCTCGCTTTC
CAGCTGGGCATGCTGGAATATGGGGAGCTGATCAATTCCTATGTCCAGAAGGCGGGCTTTACCGACCGGGACGCGATTGG
CCTGGCGCGCGTGAGCCTTGCTAACTATTTTGCCGCCGCCGTACTGATGCCTTACCACTCATTCCTGCGCGAGGCGGAGA
AGACAAAGTATGACGTGCAGCTGCTGAGCCACCGGTTCAATACAAGTTTCGAGCAGACGGCGCACCGGCTGACAACACTG
CAGAAGCCGGATGCACGAGGCATTCCATTCTTCTTCATGCGGATTGATACGGCCGGGAACGTGTCCAAACGCTTCAGCGC
GGGCCGGTTTCACTTTTCCAAGTTTGGCGGCGCCTGCCCGCTCTGGAACATCCATGAGTGTTTTGAGGCGCCGGGGCGCA
TTCGCACCCAGATTATCCAGATGCCGGATGACACGACCTATTTCTCCATCGGCCGAACCATTACGCGCACGGATGGTTTT
TACGACAAGCCGGGGCCAAAGCTTGCTATCGGTCTGGGCTGTGACATTGCCTATGCCAAACGCCTTGTCTACGCGGCCGA
TCACAATCTGGAAAAGGCCGAGCCGACGCCCATTGGCGTAAACTGTTATCTGTGCGAGCGGCAGAACTGCGCCTCCCGCG
CGCACGCGCCGCTCAGCCGGAAACTGGTGTTCGACGAACGCGCGCGCGGAATTTCGCTCTATCGTTTTCAGGACGACTAG

Upstream 100 bases:

>100_bases
GAGAGCGAGTACCTTTCTGTTTCCATTGGGTTTTTATGTTTACCTTGTAACAACAACCCTGTGTCACTTGTAAGGTTTGT
AAACTTCACCGGGGCTGGTC

Downstream 100 bases:

>100_bases
GGCCAACTCAGTCCGGCAGGACATCTCGCAGTACACGGACCAGCGACGTATCCATCATCGGCTTGCGCACGAGCGCGGCG
AAGCCGGCACGCTGGGCGGT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MAERKEKTLIGPRVRRLRRTLGITQAQMAEDLGVSASYINLIEANQRPISANLLLTLARVYDFDISDVGGAGDARLVSEL
MEVVRDPVLEAGPVGKNDVEDMVNASPDIARAFVQLYDKYRELALRTYSDNNPLTDREKVELLEESARSVESVRQMLQDH
RNYFPELDEAAEAFGAELSTLHEDPYAAMIQRLKGQHGLRVRVVPYDIMPNTLRYYDRHKRGIDLSELLPQSGRRFQLAF
QLGMLEYGELINSYVQKAGFTDRDAIGLARVSLANYFAAAVLMPYHSFLREAEKTKYDVQLLSHRFNTSFEQTAHRLTTL
QKPDARGIPFFFMRIDTAGNVSKRFSAGRFHFSKFGGACPLWNIHECFEAPGRIRTQIIQMPDDTTYFSIGRTITRTDGF
YDKPGPKLAIGLGCDIAYAKRLVYAADHNLEKAEPTPIGVNCYLCERQNCASRAHAPLSRKLVFDERARGISLYRFQDD

Sequences:

>Translated_479_residues
MAERKEKTLIGPRVRRLRRTLGITQAQMAEDLGVSASYINLIEANQRPISANLLLTLARVYDFDISDVGGAGDARLVSEL
MEVVRDPVLEAGPVGKNDVEDMVNASPDIARAFVQLYDKYRELALRTYSDNNPLTDREKVELLEESARSVESVRQMLQDH
RNYFPELDEAAEAFGAELSTLHEDPYAAMIQRLKGQHGLRVRVVPYDIMPNTLRYYDRHKRGIDLSELLPQSGRRFQLAF
QLGMLEYGELINSYVQKAGFTDRDAIGLARVSLANYFAAAVLMPYHSFLREAEKTKYDVQLLSHRFNTSFEQTAHRLTTL
QKPDARGIPFFFMRIDTAGNVSKRFSAGRFHFSKFGGACPLWNIHECFEAPGRIRTQIIQMPDDTTYFSIGRTITRTDGF
YDKPGPKLAIGLGCDIAYAKRLVYAADHNLEKAEPTPIGVNCYLCERQNCASRAHAPLSRKLVFDERARGISLYRFQDD
>Mature_478_residues
AERKEKTLIGPRVRRLRRTLGITQAQMAEDLGVSASYINLIEANQRPISANLLLTLARVYDFDISDVGGAGDARLVSELM
EVVRDPVLEAGPVGKNDVEDMVNASPDIARAFVQLYDKYRELALRTYSDNNPLTDREKVELLEESARSVESVRQMLQDHR
NYFPELDEAAEAFGAELSTLHEDPYAAMIQRLKGQHGLRVRVVPYDIMPNTLRYYDRHKRGIDLSELLPQSGRRFQLAFQ
LGMLEYGELINSYVQKAGFTDRDAIGLARVSLANYFAAAVLMPYHSFLREAEKTKYDVQLLSHRFNTSFEQTAHRLTTLQ
KPDARGIPFFFMRIDTAGNVSKRFSAGRFHFSKFGGACPLWNIHECFEAPGRIRTQIIQMPDDTTYFSIGRTITRTDGFY
DKPGPKLAIGLGCDIAYAKRLVYAADHNLEKAEPTPIGVNCYLCERQNCASRAHAPLSRKLVFDERARGISLYRFQDD

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 54340; Mature: 54208

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERKEKTLIGPRVRRLRRTLGITQAQMAEDLGVSASYINLIEANQRPISANLLLTLARV
CCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
YDFDISDVGGAGDARLVSELMEVVRDPVLEAGPVGKNDVEDMVNASPDIARAFVQLYDKY
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
RELALRTYSDNNPLTDREKVELLEESARSVESVRQMLQDHRNYFPELDEAAEAFGAELST
HHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHH
LHEDPYAAMIQRLKGQHGLRVRVVPYDIMPNTLRYYDRHKRGIDLSELLPQSGRRFQLAF
HCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCEEEEEE
QLGMLEYGELINSYVQKAGFTDRDAIGLARVSLANYFAAAVLMPYHSFLREAEKTKYDVQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSHRFNTSFEQTAHRLTTLQKPDARGIPFFFMRIDTAGNVSKRFSAGRFHFSKFGGACP
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEHHHCCCCCC
LWNIHECFEAPGRIRTQIIQMPDDTTYFSIGRTITRTDGFYDKPGPKLAIGLGCDIAYAK
CCCHHHHHCCCCHHHHHEEECCCCCEEEECCCEEECCCCCCCCCCCEEEEEECCCHHHHH
RLVYAADHNLEKAEPTPIGVNCYLCERQNCASRAHAPLSRKLVFDERARGISLYRFQDD
HHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
AERKEKTLIGPRVRRLRRTLGITQAQMAEDLGVSASYINLIEANQRPISANLLLTLARV
CCCCHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
YDFDISDVGGAGDARLVSELMEVVRDPVLEAGPVGKNDVEDMVNASPDIARAFVQLYDKY
HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
RELALRTYSDNNPLTDREKVELLEESARSVESVRQMLQDHRNYFPELDEAAEAFGAELST
HHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHH
LHEDPYAAMIQRLKGQHGLRVRVVPYDIMPNTLRYYDRHKRGIDLSELLPQSGRRFQLAF
HCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHCCCCCCEEEEEE
QLGMLEYGELINSYVQKAGFTDRDAIGLARVSLANYFAAAVLMPYHSFLREAEKTKYDVQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSHRFNTSFEQTAHRLTTLQKPDARGIPFFFMRIDTAGNVSKRFSAGRFHFSKFGGACP
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHCCCCEEHHHCCCCCC
LWNIHECFEAPGRIRTQIIQMPDDTTYFSIGRTITRTDGFYDKPGPKLAIGLGCDIAYAK
CCCHHHHHCCCCHHHHHEEECCCCCEEEECCCEEECCCCCCCCCCCEEEEEECCCHHHHH
RLVYAADHNLEKAEPTPIGVNCYLCERQNCASRAHAPLSRKLVFDERARGISLYRFQDD
HHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]