Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797909

Identifier: 114797909

GI number: 114797909

Start: 1262297

End: 1262860

Strand: Reverse

Name: 114797909

Synonym: HNE_1241

Alternate gene names: NA

Gene position: 1262860-1262297 (Counterclockwise)

Preceding gene: 114798872

Following gene: 114800095

Centisome position: 34.09

GC content: 62.06

Gene sequence:

>564_bases
ATGACAAAAATACGCTCAATCTGCGTTTACTGCGGGGCTTCGGATGCCGTTGATCCCCGCTACATCAAGCTGGCCGAAGC
CCTTGGACGCGAACTCGCCAAGCGGGGCATTCGCCTTGTGTATGGCGGCGGCGGCGTGGGCCTGATGGGCGCCTGCGCGC
GGGCGGCGCACGACGCTTCCGGTGAGGTGCTCGGCATCATGCCGCGCTTCCTGCTGCAGAAGGAACGCATCTACAAAGAC
GTCGAACACCGCATCGTCGACGACATGCACACCCGCAAGCAGATGATGTTTGATGAGGCCGATGCCTTCATCGTGTTGCC
CGGCGGGATCGGGACGCTTGAAGAGGCTGTGGAAATCCTCTCCTGGGCACGCCTTGGCCTGCATGCGAAGCCGATGGCGT
TTCTGGATGAGGACGGCTTCTGGTCGCCCTTCTTCGAGTTGCTGGAGCGGATCATCGAGGGCGGTTTCATCCCCGAGGAA
TTCCGCCAGGCGATGGTGCACAGCAAGACGTCCAGCGACGCGATCGAGGCGCTGCTCGACCGTGTGGTGGTGCTGGACAT
CTGA

Upstream 100 bases:

>100_bases
CGCGACGGAGCCCGCCTGCCCGGCCTGACAATCCGTCTGGCGAAGTCGCCTCCGGCACCTTATCAATTAGAGTAGAGAAC
GAGCTGAAAGACTGAAAAGA

Downstream 100 bases:

>100_bases
GGTTCAGCCGTGATGGCGCATGGCGGGATCGAGCCGTTCCAGCTCGGAATTCAGCCATTGGTGATGCTGCTCCAGCCGCG
TGACGGCCTCCAGATCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKD
VEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEE
FRQAMVHSKTSSDAIEALLDRVVVLDI

Sequences:

>Translated_187_residues
MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKD
VEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEE
FRQAMVHSKTSSDAIEALLDRVVVLDI
>Mature_186_residues
TKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKDV
EHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEF
RQAMVHSKTSSDAIEALLDRVVVLDI

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=206, Percent_Identity=37.8640776699029, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20768; Mature: 20637

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDAS
CCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCC
GEVLGIMPRFLLQKERIYKDVEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
SWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEFRQAMVHSKTSSDAIEALLD
HHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
RVVVLDI
HHHHHCC
>Mature Secondary Structure 
TKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDAS
CCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCC
GEVLGIMPRFLLQKERIYKDVEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
SWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEFRQAMVHSKTSSDAIEALLD
HHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
RVVVLDI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]