| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797909
Identifier: 114797909
GI number: 114797909
Start: 1262297
End: 1262860
Strand: Reverse
Name: 114797909
Synonym: HNE_1241
Alternate gene names: NA
Gene position: 1262860-1262297 (Counterclockwise)
Preceding gene: 114798872
Following gene: 114800095
Centisome position: 34.09
GC content: 62.06
Gene sequence:
>564_bases ATGACAAAAATACGCTCAATCTGCGTTTACTGCGGGGCTTCGGATGCCGTTGATCCCCGCTACATCAAGCTGGCCGAAGC CCTTGGACGCGAACTCGCCAAGCGGGGCATTCGCCTTGTGTATGGCGGCGGCGGCGTGGGCCTGATGGGCGCCTGCGCGC GGGCGGCGCACGACGCTTCCGGTGAGGTGCTCGGCATCATGCCGCGCTTCCTGCTGCAGAAGGAACGCATCTACAAAGAC GTCGAACACCGCATCGTCGACGACATGCACACCCGCAAGCAGATGATGTTTGATGAGGCCGATGCCTTCATCGTGTTGCC CGGCGGGATCGGGACGCTTGAAGAGGCTGTGGAAATCCTCTCCTGGGCACGCCTTGGCCTGCATGCGAAGCCGATGGCGT TTCTGGATGAGGACGGCTTCTGGTCGCCCTTCTTCGAGTTGCTGGAGCGGATCATCGAGGGCGGTTTCATCCCCGAGGAA TTCCGCCAGGCGATGGTGCACAGCAAGACGTCCAGCGACGCGATCGAGGCGCTGCTCGACCGTGTGGTGGTGCTGGACAT CTGA
Upstream 100 bases:
>100_bases CGCGACGGAGCCCGCCTGCCCGGCCTGACAATCCGTCTGGCGAAGTCGCCTCCGGCACCTTATCAATTAGAGTAGAGAAC GAGCTGAAAGACTGAAAAGA
Downstream 100 bases:
>100_bases GGTTCAGCCGTGATGGCGCATGGCGGGATCGAGCCGTTCCAGCTCGGAATTCAGCCATTGGTGATGCTGCTCCAGCCGCG TGACGGCCTCCAGATCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKD VEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEE FRQAMVHSKTSSDAIEALLDRVVVLDI
Sequences:
>Translated_187_residues MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKD VEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEE FRQAMVHSKTSSDAIEALLDRVVVLDI >Mature_186_residues TKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDASGEVLGIMPRFLLQKERIYKDV EHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEILSWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEF RQAMVHSKTSSDAIEALLDRVVVLDI
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=206, Percent_Identity=37.8640776699029, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 20768; Mature: 20637
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDAS CCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCC GEVLGIMPRFLLQKERIYKDVEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH SWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEFRQAMVHSKTSSDAIEALLD HHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH RVVVLDI HHHHHCC >Mature Secondary Structure TKIRSICVYCGASDAVDPRYIKLAEALGRELAKRGIRLVYGGGGVGLMGACARAAHDAS CCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCC GEVLGIMPRFLLQKERIYKDVEHRIVDDMHTRKQMMFDEADAFIVLPGGIGTLEEAVEIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH SWARLGLHAKPMAFLDEDGFWSPFFELLERIIEGGFIPEEFRQAMVHSKTSSDAIEALLD HHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH RVVVLDI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]