Click here to switch to the map view.

The map label for this gene is hcaT [H]

Identifier: 114800086

GI number: 114800086

Start: 3206624

End: 3207817

Strand: Direct

Name: hcaT [H]

Synonym: HNE_3037

Alternate gene names: 114800086

Gene position: 3206624-3207817 (Clockwise)

Preceding gene: 114800072

Following gene: 114798495

Centisome position: 86.55

GC content: 65.58

Gene sequence:

>1194_bases
ATGGCCGTGAGTGCATCCTGGCGCGCCGCCCTGGCGGCAGGCGCCGTCAATCTCGTCCTCGGCGCAAACCTTCCTTATCT
TCCCGTCTGGATGGAGCGGGTCGCGGGCATGTCCGGCGCCGAAATCGCCGGCGCCAGCACCCTCGCCATCCTTATCCGCA
TCTTTGCCGGCCCTTTGACGGCGGGTATCGCGCAGGATCACGGCCTGCGCGGCACGCTCGCCTCGGTCATGGTCGTAGCG
CTGGCCGGTTATGCCCTGCTGGTGCCGGAGTCGCCCCGCGCGGTCGATTTCTTCCTGTGCGTCCTTGTCTACAGCGCCAT
GAACCTTGTCGGGCCATTGTTCGAAGCGGTGCTCGTCTTCGGCACGCGCAATGGCCGCCCCGATTATGGCGAGGGCCGCG
CCATTGCCTCTGCCGCCTTCGTCGCTGCCAATCTCGGGGGCGGCGCGATCCTCGGCGCGTATGGTCCTGACTGGATACTC
TTCTACCTGATCGCCGCCTCGGCCATTGCCGCGCTGGCGCCCATGTTCACCAAACAGGGCGCGCGTGCCGCTGTGGCCCG
CCGCCCTCTGATCTCGACCTTCACCGACTCCTTCACCATCTACCGGATGCCCGGCGTCTTCATGTATCTGCTCGCCGCCG
CCCTCATTCAGGCCAGCCACGGCGCGTATTATGCGTTCGCTTCCAACATCTGGATCGCGCAGGGCATTGATGGCGGCCAT
ATCGGCGCGCTCTGGGCCATCGGCGTCGCGGCTGAAATCCTGCTGCTGCTGCTGTCGCGCAAGCTGCTGAAGGACATGAA
CTATTACGCCATGCTTTGGCTGGGCGGTATCGGCGCCCTGATACGCTGGACCGCCGCCGGCTTCGTCCTCCCGGTCGAGG
CGGTCTATGTCTTCCAGACCCTGCATGCCGCCAGCTTTGCCATGACGCATATCGGAACGATGCGTTTCCTTCAGGCCGCT
CTGCCCGATGACAAGCTCTCGCTGGCCTATTCGGCCAATGGCGCCCTGATCTTCGGCCCGGCCATGGCCGTCACCGGGCT
TGCCTCCGGCATCGCCTATGACGCCCTCGCGCCGGGCGGCATTGAGTCCCAGACAAAGCTCTACTGGCTGATGGTTCTTG
TCACGCTGACAGGCGTCAGCCTCATCTGGCGCGCCAGCCGCGAGCCGATCACCCCGGTTGAGCCCCACCCCTGA

Upstream 100 bases:

>100_bases
GCCGCACAAGCAGAGTATCACGCGGGCATCGGGGGCATTCTGAAAAGGACTTTGCGGCGGGCATGACAGGGCGTGCAGCA
ACCGTCACGGGCGAGGCCGC

Downstream 100 bases:

>100_bases
AACGCGCCGCGCCCAATCCCGCGCCTGCCCGCCCGCTTGACACAGCAGATATATAACATGTTATATATCTGCTGATATTG
GAGCGCCACGCATGACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MAVSASWRAALAAGAVNLVLGANLPYLPVWMERVAGMSGAEIAGASTLAILIRIFAGPLTAGIAQDHGLRGTLASVMVVA
LAGYALLVPESPRAVDFFLCVLVYSAMNLVGPLFEAVLVFGTRNGRPDYGEGRAIASAAFVAANLGGGAILGAYGPDWIL
FYLIAASAIAALAPMFTKQGARAAVARRPLISTFTDSFTIYRMPGVFMYLLAAALIQASHGAYYAFASNIWIAQGIDGGH
IGALWAIGVAAEILLLLLSRKLLKDMNYYAMLWLGGIGALIRWTAAGFVLPVEAVYVFQTLHAASFAMTHIGTMRFLQAA
LPDDKLSLAYSANGALIFGPAMAVTGLASGIAYDALAPGGIESQTKLYWLMVLVTLTGVSLIWRASREPITPVEPHP

Sequences:

>Translated_397_residues
MAVSASWRAALAAGAVNLVLGANLPYLPVWMERVAGMSGAEIAGASTLAILIRIFAGPLTAGIAQDHGLRGTLASVMVVA
LAGYALLVPESPRAVDFFLCVLVYSAMNLVGPLFEAVLVFGTRNGRPDYGEGRAIASAAFVAANLGGGAILGAYGPDWIL
FYLIAASAIAALAPMFTKQGARAAVARRPLISTFTDSFTIYRMPGVFMYLLAAALIQASHGAYYAFASNIWIAQGIDGGH
IGALWAIGVAAEILLLLLSRKLLKDMNYYAMLWLGGIGALIRWTAAGFVLPVEAVYVFQTLHAASFAMTHIGTMRFLQAA
LPDDKLSLAYSANGALIFGPAMAVTGLASGIAYDALAPGGIESQTKLYWLMVLVTLTGVSLIWRASREPITPVEPHP
>Mature_396_residues
AVSASWRAALAAGAVNLVLGANLPYLPVWMERVAGMSGAEIAGASTLAILIRIFAGPLTAGIAQDHGLRGTLASVMVVAL
AGYALLVPESPRAVDFFLCVLVYSAMNLVGPLFEAVLVFGTRNGRPDYGEGRAIASAAFVAANLGGGAILGAYGPDWILF
YLIAASAIAALAPMFTKQGARAAVARRPLISTFTDSFTIYRMPGVFMYLLAAALIQASHGAYYAFASNIWIAQGIDGGHI
GALWAIGVAAEILLLLLSRKLLKDMNYYAMLWLGGIGALIRWTAAGFVLPVEAVYVFQTLHAASFAMTHIGTMRFLQAAL
PDDKLSLAYSANGALIFGPAMAVTGLASGIAYDALAPGGIESQTKLYWLMVLVTLTGVSLIWRASREPITPVEPHP

Specific function: Probable permease involved in the uptake of 3- phenylpropionic acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=269, Percent_Identity=27.1375464684015, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005276 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41697; Mature: 41565

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSASWRAALAAGAVNLVLGANLPYLPVWMERVAGMSGAEIAGASTLAILIRIFAGPLT
CCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AGIAQDHGLRGTLASVMVVALAGYALLVPESPRAVDFFLCVLVYSAMNLVGPLFEAVLVF
HHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTRNGRPDYGEGRAIASAAFVAANLGGGAILGAYGPDWILFYLIAASAIAALAPMFTKQG
CCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ARAAVARRPLISTFTDSFTIYRMPGVFMYLLAAALIQASHGAYYAFASNIWIAQGIDGGH
CHHHHHHCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCC
IGALWAIGVAAEILLLLLSRKLLKDMNYYAMLWLGGIGALIRWTAAGFVLPVEAVYVFQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LHAASFAMTHIGTMRFLQAALPDDKLSLAYSANGALIFGPAMAVTGLASGIAYDALAPGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCCC
IESQTKLYWLMVLVTLTGVSLIWRASREPITPVEPHP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AVSASWRAALAAGAVNLVLGANLPYLPVWMERVAGMSGAEIAGASTLAILIRIFAGPLT
CCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
AGIAQDHGLRGTLASVMVVALAGYALLVPESPRAVDFFLCVLVYSAMNLVGPLFEAVLVF
HHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTRNGRPDYGEGRAIASAAFVAANLGGGAILGAYGPDWILFYLIAASAIAALAPMFTKQG
CCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
ARAAVARRPLISTFTDSFTIYRMPGVFMYLLAAALIQASHGAYYAFASNIWIAQGIDGGH
CHHHHHHCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCC
IGALWAIGVAAEILLLLLSRKLLKDMNYYAMLWLGGIGALIRWTAAGFVLPVEAVYVFQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LHAASFAMTHIGTMRFLQAALPDDKLSLAYSANGALIFGPAMAVTGLASGIAYDALAPGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHCCCCCC
IESQTKLYWLMVLVTLTGVSLIWRASREPITPVEPHP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]