Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is slyA [C]

Identifier: 114798495

GI number: 114798495

Start: 3207909

End: 3208892

Strand: Direct

Name: slyA [C]

Synonym: HNE_3038

Alternate gene names: 114798495

Gene position: 3207909-3208892 (Clockwise)

Preceding gene: 114800086

Following gene: 114799704

Centisome position: 86.58

GC content: 63.01

Gene sequence:

>984_bases
ATGACCAGAGATGTTCTCGCAGAGATGGGCTATCTCGCCCTCGGCAGCCGGATGAAGCGCCTTGCCGAGCGTATGCAGGC
GGACGCCACAAAGGTGTTTGCCGATCGCGGCCTTCCCATCCAGGGCACACATTTCCCGCTGCTGGCAGCCCTCACGACCT
ATGGCCCGCTCAGCGTCACCGAAGCTGTCGAGGCCGTTGGCATCAGCCAACCTGCGGTCACCCGCATTCACAACGCCCTG
CAGAAACTCGGCATCACCACGACCAGCCGCGTGAAGGGCGATAACCGCCAGAAGCTGATCCGCCTCACCGCGAAAGGCGA
AGCTCTGCTGGAGGAGCTGAAGGCCGATCTCTGGCCGCAGGTGCGCCGCGCCGCGCAAGGCCTCTGTGAAGGCGAGGAGA
CAGACTTCCTCTCCTGGATCGCCCGCCTGGAAGGCGCGCTTCAGGACCTCTCCCTGCACGACCGCATACGGAGCGAAGGA
GCCAGCCGCCACCCGGCCCTGCGGCTGGTCGAGTTTGACGACCGCCTCGCGCCGGAGTTTGACGCCATCACCCGCGAATG
GGTGGAAGCCATGTTCACGCTGGAAAAGAAGGACATCGAGATCATCGAAAACCCGCGCGAGAAAATCCTCGCGCCGGGCG
GAGAGATCCTGTTCGTGGAGGCAGACGGGCTCGGCATCATCGGCACCTGCGCGCTGATGCAGGTGGAAGGAAATGTCTTT
GAATTGACCAAGATGGGCGTGCGCGAAACAGCCCGCGGCCTGAAGGCCGGCGAGTTTCTGCTTCAGCGGACATTGGAGCG
CGCCCGGCAGATGCCCATCGGGGAACTCTTCCTGCTGACCAACTCCAAATGCGCCGCCGCCATCCACCTCTATGAAAAGG
CCGGCTTCATGCATGACGCAGACATTATGGCGCGTTACGGCGCCAGCTATGCCCGCTGCAATGTGGCGATGTCCTATGAT
CTCTCGAAGCCGCCCCGGATCTGA

Upstream 100 bases:

>100_bases
CACCCCTGAAACGCGCCGCGCCCAATCCCGCGCCTGCCCGCCCGCTTGACACAGCAGATATATAACATGTTATATATCTG
CTGATATTGGAGCGCCACGC

Downstream 100 bases:

>100_bases
TCCGGCGCGGCTTCAAAGGGAAGATCAACCCGTCTCGCGGTCGCCGCGCACTTCCAGGTCGTATTCACGCACCTTGCGGT
AAAGCGTCGAGCGGCCAATC

Product: transcriptional regulator, MarR family/acetyltransferase, GNAT family protein

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Gcn5-Related N-Acetyltransferase; Transcriptional Regulator MarR Family; GNAT Family Acetyltransferase; Transcriptional Regulator; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Transcriptional Regulator MarR Family Protein; Acetyltransferase Family

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNAL
QKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEG
ASRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF
ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYD
LSKPPRI

Sequences:

>Translated_327_residues
MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNAL
QKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEG
ASRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF
ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYD
LSKPPRI
>Mature_326_residues
TRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVTEAVEAVGISQPAVTRIHNALQ
KLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQVRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGA
SRHPALRLVEFDDRLAPEFDAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVFE
LTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDADIMARYGASYARCNVAMSYDL
SKPPRI

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36279; Mature: 36148

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH
EAVEAVGISQPAVTRIHNALQKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQ
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCHHHHHHHHHHHHCHH
VRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGASRHPALRLVEFDDRLAPEF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
DAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF
HHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEHHHEEEEECCCCH
ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCH
DIMARYGASYARCNVAMSYDLSKPPRI
HHHHHHCCCHHEEEEEEEECCCCCCCC
>Mature Secondary Structure 
TRDVLAEMGYLALGSRMKRLAERMQADATKVFADRGLPIQGTHFPLLAALTTYGPLSVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHH
EAVEAVGISQPAVTRIHNALQKLGITTTSRVKGDNRQKLIRLTAKGEALLEELKADLWPQ
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCHHHHHHHHHHHHCHH
VRRAAQGLCEGEETDFLSWIARLEGALQDLSLHDRIRSEGASRHPALRLVEFDDRLAPEF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHH
DAITREWVEAMFTLEKKDIEIIENPREKILAPGGEILFVEADGLGIIGTCALMQVEGNVF
HHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCEEEEECCCCCEEHHHEEEEECCCCH
ELTKMGVRETARGLKAGEFLLQRTLERARQMPIGELFLLTNSKCAAAIHLYEKAGFMHDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCH
DIMARYGASYARCNVAMSYDLSKPPRI
HHHHHHCCCHHEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA