| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114800069
Identifier: 114800069
GI number: 114800069
Start: 229281
End: 230204
Strand: Reverse
Name: 114800069
Synonym: HNE_0238
Alternate gene names: NA
Gene position: 230204-229281 (Counterclockwise)
Preceding gene: 114799076
Following gene: 114800356
Centisome position: 6.21
GC content: 62.77
Gene sequence:
>924_bases ATGAGCGACCCTAAAACCTATCTCGGCTGGAAGGTGGATTACACAACACCGCCCGGCGAAGCCGCTCTGATCGCGCCGGA TTCCATCACCTGGCAGGTCTTCAAGAACCCCGTTGCGCTCGCAATCGGCGGCGTCTGCGCCGTTCTGCTGGAATTTGCCG ATGCCCGTATCCGCTCCGGCGTGTGGGATCATTCAGTCTTCAAGACAGATCCTATCGGCCGCTCCAAGCGCACCGGCACG GCCGCCATGGTCGGCACTTATGGCCCCGCCAGTGCCGCCCGCCGCGTCATCCAGGGCGTCACCAACATGCATGCGCGCGT GAAAGGCGAAACGCCCTCCGGGGAATCCTACCGCGCCCTCGATCCGGAACTCCTCGACTGGGTCAGTGCAACGGCCGCTT ACGGGTTCCTGATGGCCTACCACCGCTTTGTCCGGCCCCTGACCGAGGACGAGATGAACCGGTTCTTTGCAGAAGGCGAA GCGGTTGCGCGTCTTTATGGTGTTCAGGAACCACTGCGCTCGGTCGAACACTTCAACTGCATGATGGCCCGCCTCCTGCC CCGCTTTGAACCCCACCCCATCAACACCGAGTTTCTGGGCATCATGAAATCCGGGCGCGCCGCGCCGGGCGTGCCCAAAG GTCTGCAGAGCGCGCTTGTCCATGCCGCCGTCGACATACTTCCCAAACAGGTCCGCGAACGCCTCAAACTCGGCGCGGAA TACGATCTTTCGCCGCTTGGTAGACTGACTGTGAAAAGCATGGCTGCCATCGCCGAGCGTACACCCGATCTGAACGGCCC GCCGGCGCAGGCGTCAGAGCGCATCGGCCTGCCACGCAGCTTTGTCTGGAAATCTGAAACTCAACGCCGCCGCCTTGTTG AGGCCGCACGCACTGCATCCATGGCCAAGGAGGCCCCCGCATGA
Upstream 100 bases:
>100_bases CCCGCCTAGAGCGCGCTTAAGCTCTGCGGTGACGCCACGTCGCGTCTGTTGAGGCAATGCGCCCTGAGATATGTTGGCAC AAACTCCTGGGGAGGAGAGC
Downstream 100 bases:
>100_bases ACCTCTCCTTCACCCGCGAAGAAGAAGCCTTCCGCCAGGAAGTTCGCACCTTTCTGGACGCGCACCTGACCGACGACCTG CGCGCCTACGCAAAGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSDPKTYLGWKVDYTTPPGEAALIAPDSITWQVFKNPVALAIGGVCAVLLEFADARIRSGVWDHSVFKTDPIGRSKRTGT AAMVGTYGPASAARRVIQGVTNMHARVKGETPSGESYRALDPELLDWVSATAAYGFLMAYHRFVRPLTEDEMNRFFAEGE AVARLYGVQEPLRSVEHFNCMMARLLPRFEPHPINTEFLGIMKSGRAAPGVPKGLQSALVHAAVDILPKQVRERLKLGAE YDLSPLGRLTVKSMAAIAERTPDLNGPPAQASERIGLPRSFVWKSETQRRRLVEAARTASMAKEAPA
Sequences:
>Translated_307_residues MSDPKTYLGWKVDYTTPPGEAALIAPDSITWQVFKNPVALAIGGVCAVLLEFADARIRSGVWDHSVFKTDPIGRSKRTGT AAMVGTYGPASAARRVIQGVTNMHARVKGETPSGESYRALDPELLDWVSATAAYGFLMAYHRFVRPLTEDEMNRFFAEGE AVARLYGVQEPLRSVEHFNCMMARLLPRFEPHPINTEFLGIMKSGRAAPGVPKGLQSALVHAAVDILPKQVRERLKLGAE YDLSPLGRLTVKSMAAIAERTPDLNGPPAQASERIGLPRSFVWKSETQRRRLVEAARTASMAKEAPA >Mature_306_residues SDPKTYLGWKVDYTTPPGEAALIAPDSITWQVFKNPVALAIGGVCAVLLEFADARIRSGVWDHSVFKTDPIGRSKRTGTA AMVGTYGPASAARRVIQGVTNMHARVKGETPSGESYRALDPELLDWVSATAAYGFLMAYHRFVRPLTEDEMNRFFAEGEA VARLYGVQEPLRSVEHFNCMMARLLPRFEPHPINTEFLGIMKSGRAAPGVPKGLQSALVHAAVDILPKQVRERLKLGAEY DLSPLGRLTVKSMAAIAERTPDLNGPPAQASERIGLPRSFVWKSETQRRRLVEAARTASMAKEAPA
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33629; Mature: 33498
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPKTYLGWKVDYTTPPGEAALIAPDSITWQVFKNPVALAIGGVCAVLLEFADARIRSG CCCCCCCCCEEEECCCCCCCEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC VWDHSVFKTDPIGRSKRTGTAAMVGTYGPASAARRVIQGVTNMHARVKGETPSGESYRAL CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC DPELLDWVSATAAYGFLMAYHRFVRPLTEDEMNRFFAEGEAVARLYGVQEPLRSVEHFNC CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMARLLPRFEPHPINTEFLGIMKSGRAAPGVPKGLQSALVHAAVDILPKQVRERLKLGAE HHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC YDLSPLGRLTVKSMAAIAERTPDLNGPPAQASERIGLPRSFVWKSETQRRRLVEAARTAS CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH MAKEAPA HHHCCCC >Mature Secondary Structure SDPKTYLGWKVDYTTPPGEAALIAPDSITWQVFKNPVALAIGGVCAVLLEFADARIRSG CCCCCCCCEEEECCCCCCCEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC VWDHSVFKTDPIGRSKRTGTAAMVGTYGPASAARRVIQGVTNMHARVKGETPSGESYRAL CCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC DPELLDWVSATAAYGFLMAYHRFVRPLTEDEMNRFFAEGEAVARLYGVQEPLRSVEHFNC CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMARLLPRFEPHPINTEFLGIMKSGRAAPGVPKGLQSALVHAAVDILPKQVRERLKLGAE HHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC YDLSPLGRLTVKSMAAIAERTPDLNGPPAQASERIGLPRSFVWKSETQRRRLVEAARTAS CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH MAKEAPA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA