Click here to switch to the map view.

The map label for this gene is degT [H]

Identifier: 114799993

GI number: 114799993

Start: 795428

End: 796582

Strand: Direct

Name: degT [H]

Synonym: HNE_0783

Alternate gene names: 114799993

Gene position: 795428-796582 (Clockwise)

Preceding gene: 114797221

Following gene: 114797997

Centisome position: 21.47

GC content: 62.25

Gene sequence:

>1155_bases
ATGCAGTTCATTGACCTTCAGGCCCAGCGCCGCCGTATCGAGAGCCAGATCAATTCGGCCGTTCAGGCGGTGATCGAGAG
CGGGCGGTATGTGCTTGGCCCGGAAGTGGGCGAAGTGGAGAAGCAGCTGGCGGCCTGGTGCGGGGCCAAACATGCCGTTT
CCTGCGCCAACGGAACCGACGCGCTGGCGCTGGCGCTGATGGCGTGGGCGTTGAAACCGGGCGACGCAGTGTTCTGTCCG
AGCTTTACCTTTGTGGCGACCGCGCAGGTTGTGCCCTGGCTGGGGGCAACGCCGGTGTTTGTCGACATCCATGCCGAGAC
TTACAATATGGACCCGGCGAGCCTTGAGGCGCAGATTGCGCGCGTGAAGGCGGAGGGCAGACTGACACCTAAGGTGGTGA
TTGCGGTGGACCTCTTTGGTCAGCCAGCGGATTATCCCGCCATCAAGGCGATCTGTGACCGGGAAGGGATGAAGCTTATT
GCCGACACGGCGCAGGGCTATGGCTGCACGCTGAATGGCAAGCATCCTTCTGACTGGGCCGACATTGCCACGACGAGTTT
CTTTCCCGCAAAGCCGCTGGGCTGTTATGGCGATGGCGGGGCGATTGTGACCAATGACAGCGCGCTGGCCGAGCTGATCG
AGTCGCTGCGGGTTTATGGCAAGGTGACGCCGACCGATGCGGCGCAGCGGAACTTTCATCATGACCCGAAATACCTCTCG
CTCCGGGTGGGGATGAATTCACGGCTGGATACAATCCAGGCAGCGATCCTGCTGGAGAAGCTGAAGATCTTTGCCGATGA
AATCGAGAAGCGCGAAGCGGTTGCGCAGCGCTATTCGCAGGCGCTGCGCGGCAAGGTGCGCCGTGTGCCGGGCGTGATTG
CGGGCGGGCAGAGTGTCTGGGCGCAATATGTGATCGAGCATGACCAGCGCGATGGCCTGCAGGCCCATCTGACCGCCAAC
GGCATTCCCAGCATGGTCTACTACCCCGTGCCAATCCATCAGCAGGACTTTGCGGCCCGCTTTGCGCCGCCGGACGGCAC
GTTGCCGGTGACCGAGACGGCGAGCCGGCATGTGCTGGCCCTGCCGATGCACCCTTATCTGTCTGCGGAAGACCAGGACC
GGATTGTTGAAGCGATGCTCGGGTTCAACGGGTGA

Upstream 100 bases:

>100_bases
GGACATAAGTTGAAACCAAGTGTGACTGGCCTAAAGCGCCCGTGCGCGCCAGACATCGGGCAGGGTCTGAGACTGGCCCG
GGGATCAGGATACAAGAAAC

Downstream 100 bases:

>100_bases
TCAGGGCTGAGCTCTGCACGGTGAGGCCAGCGCAGACCCCCAATTGTATTCAGGTAGTTCGTCGCCCGACTGTGGGCCGA
AATTGCGAGAGATCGTTGCT

Product: DegT/DnrJ/EryC1/StrS aminotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MQFIDLQAQRRRIESQINSAVQAVIESGRYVLGPEVGEVEKQLAAWCGAKHAVSCANGTDALALALMAWALKPGDAVFCP
SFTFVATAQVVPWLGATPVFVDIHAETYNMDPASLEAQIARVKAEGRLTPKVVIAVDLFGQPADYPAIKAICDREGMKLI
ADTAQGYGCTLNGKHPSDWADIATTSFFPAKPLGCYGDGGAIVTNDSALAELIESLRVYGKVTPTDAAQRNFHHDPKYLS
LRVGMNSRLDTIQAAILLEKLKIFADEIEKREAVAQRYSQALRGKVRRVPGVIAGGQSVWAQYVIEHDQRDGLQAHLTAN
GIPSMVYYPVPIHQQDFAARFAPPDGTLPVTETASRHVLALPMHPYLSAEDQDRIVEAMLGFNG

Sequences:

>Translated_384_residues
MQFIDLQAQRRRIESQINSAVQAVIESGRYVLGPEVGEVEKQLAAWCGAKHAVSCANGTDALALALMAWALKPGDAVFCP
SFTFVATAQVVPWLGATPVFVDIHAETYNMDPASLEAQIARVKAEGRLTPKVVIAVDLFGQPADYPAIKAICDREGMKLI
ADTAQGYGCTLNGKHPSDWADIATTSFFPAKPLGCYGDGGAIVTNDSALAELIESLRVYGKVTPTDAAQRNFHHDPKYLS
LRVGMNSRLDTIQAAILLEKLKIFADEIEKREAVAQRYSQALRGKVRRVPGVIAGGQSVWAQYVIEHDQRDGLQAHLTAN
GIPSMVYYPVPIHQQDFAARFAPPDGTLPVTETASRHVLALPMHPYLSAEDQDRIVEAMLGFNG
>Mature_384_residues
MQFIDLQAQRRRIESQINSAVQAVIESGRYVLGPEVGEVEKQLAAWCGAKHAVSCANGTDALALALMAWALKPGDAVFCP
SFTFVATAQVVPWLGATPVFVDIHAETYNMDPASLEAQIARVKAEGRLTPKVVIAVDLFGQPADYPAIKAICDREGMKLI
ADTAQGYGCTLNGKHPSDWADIATTSFFPAKPLGCYGDGGAIVTNDSALAELIESLRVYGKVTPTDAAQRNFHHDPKYLS
LRVGMNSRLDTIQAAILLEKLKIFADEIEKREAVAQRYSQALRGKVRRVPGVIAGGQSVWAQYVIEHDQRDGLQAHLTAN
GIPSMVYYPVPIHQQDFAARFAPPDGTLPVTETASRHVLALPMHPYLSAEDQDRIVEAMLGFNG

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=375, Percent_Identity=30.1333333333333, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI2367285, Length=343, Percent_Identity=27.4052478134111, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41694; Mature: 41694

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIDLQAQRRRIESQINSAVQAVIESGRYVLGPEVGEVEKQLAAWCGAKHAVSCANGTD
CCEECHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCHH
ALALALMAWALKPGDAVFCPSFTFVATAQVVPWLGATPVFVDIHAETYNMDPASLEAQIA
HHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECEEECCCHHHHHHHHH
RVKAEGRLTPKVVIAVDLFGQPADYPAIKAICDREGMKLIADTAQGYGCTLNGKHPSDWA
HHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCHH
DIATTSFFPAKPLGCYGDGGAIVTNDSALAELIESLRVYGKVTPTDAAQRNFHHDPKYLS
HHHHCCCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEE
LRVGMNSRLDTIQAAILLEKLKIFADEIEKREAVAQRYSQALRGKVRRVPGVIAGGQSVW
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHH
AQYVIEHDQRDGLQAHLTANGIPSMVYYPVPIHQQDFAARFAPPDGTLPVTETASRHVLA
HHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHEECCCCCCCCCCCCCCCCEEE
LPMHPYLSAEDQDRIVEAMLGFNG
EECCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQFIDLQAQRRRIESQINSAVQAVIESGRYVLGPEVGEVEKQLAAWCGAKHAVSCANGTD
CCEECHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCHH
ALALALMAWALKPGDAVFCPSFTFVATAQVVPWLGATPVFVDIHAETYNMDPASLEAQIA
HHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECEEECCCHHHHHHHHH
RVKAEGRLTPKVVIAVDLFGQPADYPAIKAICDREGMKLIADTAQGYGCTLNGKHPSDWA
HHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCHH
DIATTSFFPAKPLGCYGDGGAIVTNDSALAELIESLRVYGKVTPTDAAQRNFHHDPKYLS
HHHHCCCCCCCCCCEECCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEE
LRVGMNSRLDTIQAAILLEKLKIFADEIEKREAVAQRYSQALRGKVRRVPGVIAGGQSVW
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHH
AQYVIEHDQRDGLQAHLTANGIPSMVYYPVPIHQQDFAARFAPPDGTLPVTETASRHVLA
HHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCHHHEECCCCCCCCCCCCCCCCEEE
LPMHPYLSAEDQDRIVEAMLGFNG
EECCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]